RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 ANKRD17O75179 2603 aaKnown RBP10.37□□□□□ -0.75
SLIRP-206ENST00000556375 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 A0A1W2PNV4 684 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 SYT5O00445 386 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 ADAMDEC1O15204 470 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 TNFSF13O75888 250 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 UBTFL6P0CB48 400 aaPredicted RBP10.36□□□□□ -0.75
SLIRP-206ENST00000556375 NR2F1P10589 423 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 ETFAP13804 333 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 PGCP20142 388 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 CAPN3P20807 821 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 RPS4Y1P22090 263 aaKnown RBP10.36□□□□□ -0.75
SLIRP-206ENST00000556375 UQCRC1P31930 480 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 PGM1P36871 562 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 CRATP43155 626 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 EIF1AXP47813 144 aaKnown RBP10.36□□□□□ -0.75
SLIRP-206ENST00000556375 AGFG1P52594 562 aaKnown RBP10.36□□□□□ -0.75
SLIRP-206ENST00000556375 DLX5P56178 289 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 DSTNP60981 165 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 FADDQ13158 208 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 SELENBP1Q13228 472 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 PON3Q15166 354 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 QPRTQ15274 297 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 TOMM34Q15785 309 aaPredicted RBP10.36□□□□□ -0.75
SLIRP-206ENST00000556375 SGCBQ16585 318 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 AGKQ53H12 422 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 LRIF1Q5T3J3 769 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 CMIPQ8IY22 773 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 OR10D3Q8NH80 312 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 OR2V1Q8NHB1 315 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 FBXO27Q8NI29 283 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 PMM1Q92871 262 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 THOC1Q96FV9 657 aaKnown RBP10.36□□□□□ -0.75
SLIRP-206ENST00000556375 KLHL15Q96M94 604 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 QRSL1Q9H0R6 528 aaKnown RBP10.36□□□□□ -0.75
SLIRP-206ENST00000556375 PIGMQ9H3S5 423 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 RAD21L1Q9H4I0 556 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 ZNF385DQ9H6B1 395 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 TMEM185BQ9H7F4 350 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 RNF122Q9H9V4 155 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 SLC52A3Q9NQ40 469 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 EXOSC3Q9NQT5 275 aaKnown RBP10.36□□□□□ -0.75
SLIRP-206ENST00000556375 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.36□□□□□ -0.75
SLIRP-206ENST00000556375 THUMPD1Q9NXG2 353 aaKnown RBP10.36□□□□□ -0.75
SLIRP-206ENST00000556375 CALML5Q9NZT1 146 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 KCNN3Q9UGI6 736 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 PACSIN3Q9UKS6 424 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 PCDHB14Q9Y5E9 798 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 POLQO75417 2590 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 MYO9AB2RTY4 2548 aa10.36□□□□□ -0.75
SLIRP-206ENST00000556375 DSPPQ9NZW4 1301 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 A0A0G2JND7 137 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 A0A0J9YW62 118 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 AGAP5A6NIR3 686 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 GJE1A6NN92 205 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 CLIC1O00299 241 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 TNFSF11O14788 317 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 BCAS1O75363 584 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-206ENST00000556375 CYP7B1O75881 506 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 BCHEP06276 602 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 TROVE2P10155 538 aaKnown RBP eCLIP10.35□□□□□ -0.75
SLIRP-206ENST00000556375 BMP2P12643 396 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 NCF2P19878 526 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-206ENST00000556375 IL11P20809 199 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 SFTPDP35247 375 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 CRISP3P54108 245 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 KCNJ10P78508 379 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 SORDQ00796 357 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 PLAURQ03405 335 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 GNA13Q14344 377 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 MAPK11Q15759 364 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 PDSS1Q5T2R2 415 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 C3orf33Q6P1S2 294 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 HMGN2P46Q86SG4 172 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 MSRB3Q8IXL7 192 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 LILRA2Q8N149 483 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 WDR60Q8WVS4 1066 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 TMEM234Q8WY98 164 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 ZNF524Q96C55 264 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 ZG16BQ96DA0 208 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 THUMPD3Q9BV44 507 aaKnown RBP10.35□□□□□ -0.75
SLIRP-206ENST00000556375 MTHFD2LQ9H903 347 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-206ENST00000556375 MCTS1Q9ULC4 181 aaKnown RBP10.35□□□□□ -0.75
SLIRP-206ENST00000556375 CSMD1Q96PZ7 3565 aa10.35□□□□□ -0.75
SLIRP-206ENST00000556375 TRBV5-3A0A0A0MS03 114 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 A0A1W2PP18 115 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 TMEM247A6NEH6 219 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 CLDN24A6NM45 220 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 MSTNO14793 375 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 EFNA2O43921 213 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 CXCL13O43927 109 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 AQP8O94778 261 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 SYNGR4O95473 234 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 OPN1LWP04000 364 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 DBIP07108 87 aaKnown RBP10.34□□□□□ -0.75
SLIRP-206ENST00000556375 TFPTP0C1Z6 253 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 NID1P14543 1247 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 PPIBP23284 216 aaKnown RBP10.34□□□□□ -0.75
SLIRP-206ENST00000556375 SHC1P29353 583 aa10.34□□□□□ -0.75
SLIRP-206ENST00000556375 SLC6A8P48029 635 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms