RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 PRKACBP22694 351 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 MSNP26038 577 aaKnown RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 GJB2P29033 226 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 EEF1DP29692 281 aaKnown RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 GDI1P31150 447 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 LONP1P36776 959 aaKnown RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 ACAA2P42765 397 aaKnown RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 RPS9P46781 194 aaKnown RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 ACOT2P49753 483 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 YWHAHQ04917 246 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 CSTF1Q05048 431 aaKnown RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 CETN1Q12798 172 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 DOC2AQ14183 400 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 DPYSL2Q16555 572 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 ZNF674Q2M3X9 581 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 POM121L1PQ3SYA9 428 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 TOR1AIP1Q5JTV8 583 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 MUC21Q5SSG8 566 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 PDPK2PQ6A1A2 396 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 KRT80Q6KB66 452 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 FAM173BQ6P4H8 233 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 ZYG11AQ6WRX3 759 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 Q6ZVH6 145 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 NCCRP1Q6ZVX7 275 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 Q71RC1 249 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 CTAGE6Q86UF2 777 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 COMTD1Q86VU5 262 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 GPBP1Q86WP2 473 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 C12orf56Q8IXR9 622 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 ATAD1Q8NBU5 361 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 AGR3Q8TD06 166 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 SLC5A11Q8WWX8 675 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 LZICQ8WZA0 190 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 DNASE1L2Q92874 299 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 SMARCD2Q92925 531 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 PTP4A1Q93096 173 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 PSMG2Q969U7 264 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 PPP1R14BQ96C90 147 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 DNAJC19Q96DA6 116 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 DTNBP1Q96EV8 351 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 LINC00167Q96N53 147 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 PKMYT1Q99640 499 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 COQ7Q99807 217 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 MGME1Q9BQP7 344 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 ALKBH7Q9BT30 221 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 SPXQ9BT56 116 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 YTHDF1Q9BYJ9 559 aaKnown RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 DPH5Q9H2P9 285 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 FNDC4Q9H6D8 234 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 HPS4Q9NQG7 708 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 SDHAF3Q9NRP4 125 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 ACTR3BQ9P1U1 418 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 FAM153AQ9UHL3 310 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 NDRG2Q9UN36 371 aaKnown RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 NSG2Q9Y328 171 aa3.66□□□□□ -1.82
PRPF39-209ENST00000556353 URB1O60287 2271 aaKnown RBP3.66□□□□□ -1.82
PRPF39-209ENST00000556353 AHCTF1Q8WYP5 2266 aa3.65□□□□□ -1.82
PRPF39-209ENST00000556353 DOCK4Q8N1I0 1966 aa3.65□□□□□ -1.82
PRPF39-209ENST00000556353 UBR5O95071 2799 aaPredicted RBP3.65□□□□□ -1.82
PRPF39-209ENST00000556353 SPTAN1Q13813 2472 aaKnown RBP3.65□□□□□ -1.82
PRPF39-209ENST00000556353 GOLGA6L7A0A1B0GV03 622 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 MYBPHLA2RUH7 354 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 LRRD1A4D1F6 860 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 SLC9B1P1A6NJY1 282 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 A8MU76 341 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 SPECC1L-ADORA2AF8WAN1 911 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 TRAPPC3O43617 180 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 SMPD2O60906 423 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 KERAO60938 352 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 NIPSNAP2O75323 286 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 FYNP06241 537 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 CLTAP09496 248 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 HMGA1P17096 107 aaKnown RBP3.65□□□□□ -1.83
PRPF39-209ENST00000556353 PSMC3P17980 439 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 CYP3A5P20815 502 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 ZBTB25P24278 435 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 CCNE1P24864 410 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 HOXA6P31267 233 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 TRIM23P36406 574 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 MFAP3P55082 362 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 UBE2IP63279 158 aaKnown RBP3.65□□□□□ -1.83
PRPF39-209ENST00000556353 GTF2BQ00403 316 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 MZT1Q08AG7 82 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 HSPA14Q0VDF9 509 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 PLD1Q13393 1074 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 CYLC2Q14093 348 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-209ENST00000556353 GNA13Q14344 377 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 SPCS2Q15005 226 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 MORF4L2Q15014 288 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 SNCBQ16143 134 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 LRRC37A5PQ49AS3 106 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 ZNF542PQ5EBM4 170 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 NHLRC3Q5JS37 347 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 LRRC73Q5JTD7 316 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 LINC00242Q5T6M2 205 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 SDHAF4Q5VUM1 108 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 WSCD1Q658N2 575 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 SASS6Q6UVJ0 657 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 NLRP9Q7RTR0 991 aa3.65□□□□□ -1.83
PRPF39-209ENST00000556353 MFSD6LQ8IWD5 586 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms