RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CRISP3P54108 245 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 PLAURQ03405 335 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 FADDQ13158 208 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 CTU2Q2VPK5 515 aaKnown RBP13.66□□□□□ -0.22
ACTN1-217ENST00000556203 RPS26P11Q5JNZ5 115 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-217ENST00000556203 MEX3BQ6ZN04 569 aaKnown RBP13.66□□□□□ -0.22
ACTN1-217ENST00000556203 ESPNLQ6ZVH7 1005 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 CMIPQ8IY22 773 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 PEX5LQ8IYB4 626 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 LILRA2Q8N149 483 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 ACBD4Q8NC06 268 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 OR10D3Q8NH80 312 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 FNDC9Q8TBE3 224 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 WDR60Q8WVS4 1066 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 PMM1Q92871 262 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 MAL2Q969L2 176 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 TMEM19Q96HH6 336 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 ADGRG7Q96K78 797 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 SPOCK3Q9BQ16 436 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 TREX2Q9BQ50 279 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-217ENST00000556203 SFXN3Q9BWM7 321 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 ENKD1Q9H0I2 346 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-217ENST00000556203 NDUFAF1Q9Y375 327 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 ZNF175Q9Y473 711 aa13.66□□□□□ -0.22
ACTN1-217ENST00000556203 DSPPQ9NZW4 1301 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 TRBV5-3A0A0A0MS03 114 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 A0A0J9YW62 118 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 GJE1A6NN92 205 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 EEF1E1-BLOC1S5C9J1V9 151 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 ANGPT2O15123 496 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 ADAMDEC1O15204 470 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 EEF1E1O43324 174 aaKnown RBP13.65□□□□□ -0.22
ACTN1-217ENST00000556203 EFNA2O43921 213 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 NTN1O95631 604 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 DBIP07108 87 aaKnown RBP13.65□□□□□ -0.22
ACTN1-217ENST00000556203 BMP2P12643 396 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 PRF1P14222 555 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 IL7RP16871 459 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 IGFBP2P18065 325 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 PGCP20142 388 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 PPIBP23284 216 aaKnown RBP13.65□□□□□ -0.22
ACTN1-217ENST00000556203 SHC1P29353 583 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 RYKP34925 604 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 SFTPDP35247 375 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 SESN3P58005 492 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 GNA13Q14344 377 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 SLC25A53Q5H9E4 307 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 GCNT6Q5T4J0 391 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 PPP4R4Q6NUP7 873 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 DLEU7Q6UYE1 221 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 ATP6V1C2Q8NEY4 427 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 OR52P1PQ8NH57 321 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 OR2V1Q8NHB1 315 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 ZNF563Q8TA94 476 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 TMEM234Q8WY98 164 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 CNOT9Q92600 299 aaKnown RBP13.65□□□□□ -0.22
ACTN1-217ENST00000556203 KLHL15Q96M94 604 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 ZNF317Q96PQ6 595 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-217ENST00000556203 A4GALTQ9NPC4 353 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 EXOSC3Q9NQT5 275 aaKnown RBP13.65□□□□□ -0.22
ACTN1-217ENST00000556203 KLHL14Q9P2G3 628 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 KIAA1549Q9HCM3 1950 aa13.65□□□□□ -0.22
ACTN1-217ENST00000556203 A0A1W2PNV4 684 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 ETV2O00321 342 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-217ENST00000556203 CXCL13O43927 109 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 AQP8O94778 261 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 NID1P14543 1247 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 UQCRC1P31930 480 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 SLC6A8P48029 635 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 ASCL1P50553 236 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 SELENBP1Q13228 472 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 TMEM176BQ3YBM2 270 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-217ENST00000556203 LIN52Q52LA3 116 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 PDSS1Q5T2R2 415 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 MRPL2Q5T653 305 aaKnown RBP13.64□□□□□ -0.23
ACTN1-217ENST00000556203 HBMQ6B0K9 141 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 OR2A2Q6IF42 318 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 DHDDSQ86SQ9 333 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 RETREG3Q86VR2 466 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 VRK2Q86Y07 508 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 MCEMP1Q8IX19 187 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 C10orf111Q8N326 155 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 TSPEARQ8WU66 669 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 ST8SIA1Q92185 356 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 CPPED1Q9BRF8 314 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-217ENST00000556203 IKZF5Q9H5V7 419 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
ACTN1-217ENST00000556203 ACER3Q9NUN7 267 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 PAQR5Q9NXK6 330 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-217ENST00000556203 DNAJB12Q9NXW2 375 aaKnown RBP13.64□□□□□ -0.23
ACTN1-217ENST00000556203 CORO2BQ9UQ03 480 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 GMEB1Q9Y692 573 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 PCNX3Q9H6A9 2034 aa13.64□□□□□ -0.23
ACTN1-217ENST00000556203 NBPF19A0A087WUL8 3843 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 SETXQ7Z333 2677 aaKnown RBP13.63□□□□□ -0.23
ACTN1-217ENST00000556203 A0A0G2JPF8 293 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 EVPLLA8MZ36 301 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 HNRNPCL2B2RXH8 293 aa13.63□□□□□ -0.23
ACTN1-217ENST00000556203 HNRNPCL3B7ZW38 293 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms