RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 CAMKMTQ7Z624 323 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 MALSU1Q96EH3 234 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 SLC6A18Q96N87 628 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 PAPOLGQ9BWT3 736 aaKnown RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF443Q9Y2A4 671 aaPredicted RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 HEMK1Q9Y5R4 338 aaPredicted RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 A3GALT2U3KPV4 340 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 FAM227AF5H4B4 570 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 WNT11O96014 354 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 HEXAP06865 529 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 SLC35E2P0CK97 266 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 TPT1P13693 172 aaKnown RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 CBLP22681 906 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 DCDP81605 110 aaKnown RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 PDE7AQ13946 482 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 RPE65Q16518 533 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 NKAIN3Q8N8D7 197 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 NAXEQ8NCW5 288 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 CPEB3Q8NE35 698 aaKnown RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 OR7G2Q8NG99 324 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 OR4N2Q8NGD1 307 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 OR4K15Q8NH41 348 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF480Q8WV37 535 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 SLC41A2Q96JW4 573 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 UTP23Q9BRU9 249 aaKnown RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 SLC46A2Q9BY10 475 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 ULBP2Q9BZM5 246 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 PCED1AQ9H1Q7 454 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 LYRM4Q9HD34 91 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 MUTYHQ9UIF7 546 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 ENPP5Q9UJA9 477 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 POLHQ9Y253 713 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 IER3IP1Q9Y5U9 82 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 ETV7Q9Y603 341 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 MRPL33O75394 65 aaKnown RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 FABP1P07148 127 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 CEBPBP17676 345 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 IL32P24001 234 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 HTR6P50406 440 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 RACK1P63244 317 aaKnown RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ADARB1P78563 741 aaKnown RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 CTBSQ01459 385 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 C3orf38Q5JPI3 329 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 PGAP1Q75T13 922 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 HSD11B1LQ7Z5J1 315 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 FAM83FQ8NEG4 500 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ZPBPQ9BS86 351 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ZDHHC5Q9C0B5 715 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 OR52D1Q9H346 318 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 GPATCH2Q9NW75 528 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 LRIT1Q9P2V4 623 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ADAMTS6Q9UKP5 1117 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 INTS6Q9UL03 887 aaKnown RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 PCDHGA8Q9Y5G5 932 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 RAB19A4D1S5 217 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 BTBD17A6NE02 478 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 KLRC4-KLRK1H3BQV0 150 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ARSBP15848 533 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF14P17017 642 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 LBX1P52954 281 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 REEP5Q00765 189 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 IL10RAQ13651 578 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ESCO2Q56NI9 601 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 MTFR2Q6P444 385 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF322Q6U7Q0 402 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 TMEM64Q6YI46 380 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 WDR5BQ86VZ2 330 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 DND1Q8IYX4 353 aaKnown RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 C19orf47Q8N9M1 422 aaKnown RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 BEST4Q8NFU0 473 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 OR6F1Q8NGZ6 308 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 OR1S1Q8NH92 325 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 OR2M2Q96R28 347 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 PIGQQ9BRB3 760 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 BOCQ9BWV1 1114 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 C1orf198Q9H425 327 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 NME7Q9Y5B8 376 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 HOXC11O43248 304 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 SULT1B1O43704 296 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 CRTAPO75718 401 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 SLC22A5O76082 557 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 MAS1P04201 325 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 CDK4P11802 303 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 GJA4P35212 333 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ADRA1AP35348 466 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 RNF144AP50876 292 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 SSR4P51571 173 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 RAP2BP61225 183 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ALKAL1Q6UXT8 129 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ADGRG5Q8IZF4 528 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 FRMD1Q8N878 549 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 SLC22A12Q96S37 553 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 STACQ99469 402 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 JAM3Q9BX67 310 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ACPTQ9BZG2 426 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 TAAR2Q9P1P5 351 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 THAP10Q9P2Z0 257 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-216ENST00000556083 LHX3Q9UBR4 397 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 PCDHB10Q9UN67 800 aa10.04□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF281Q9Y2X9 895 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms