RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CD1CP29017 333 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 PRKAR1BP31321 381 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 GALNSP34059 522 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 NUP107P57740 925 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 ESRRGP62508 458 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 SNRPNP63162 240 aaKnown RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 CSNK2BP67870 215 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 CHRNEQ04844 493 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 ILKQ13418 452 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 APOFQ13790 326 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 SERTAD2Q14140 314 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 LARS2Q15031 903 aaKnown RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 EXOC3L2Q2M3D2 409 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 PRICKLE4Q2TBC4 344 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 CYP27C1Q4G0S4 372 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 LIN52Q52LA3 116 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 TRMT12Q53H54 448 aaKnown RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 DCST1Q5T197 706 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF691Q5VV52 312 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 HEPHL1Q6MZM0 1159 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 TMEM71Q6P5X7 295 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 DHRS4L2Q6PKH6 230 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 FAM111BQ6SJ93 734 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 DEF8Q6ZN54 512 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 PRSS42Q7Z5A4 293 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 TSPYL5Q86VY4 417 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 PEX5LQ8IYB4 626 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 D2HGDHQ8N465 521 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 SLC5A8Q8N695 610 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 EID2Q8N6I1 236 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 COX18Q8N8Q8 333 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 SLC16A11Q8NCK7 471 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 TMEM52Q8NDY8 209 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 GPR32P1Q8NGA4 272 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 OR4C15Q8NGM1 316 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 OR52P1PQ8NH57 321 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 OR51Q1Q8NH59 317 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 OR52J3Q8NH60 311 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 OR4C6Q8NH72 309 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 VANGL1Q8TAA9 524 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 CDS1Q92903 461 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 OTUB1Q96FW1 271 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 SLC41A2Q96JW4 573 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 DGAT2Q96PD7 388 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 TAAR9Q96RI9 348 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 STACQ99469 402 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 FEVQ99581 238 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 BARD1Q99728 777 aaKnown RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 PSD2Q9BQI7 771 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 FNDC11Q9BVV2 318 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 ALOXE3Q9BYJ1 711 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 SPRTNQ9H040 489 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 ARMC7Q9H6L4 198 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 EVA1AQ9H8M9 152 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 VCX3AQ9NNX9 186 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 ADAP2Q9NPF8 381 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 PAPOLBQ9NRJ5 636 aaKnown RBP6.3□□□□□ -1.4
SLIRP-204ENST00000555890 DUSP22Q9NRW4 184 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 CUTCQ9NTM9 273 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 ACER3Q9NUN7 267 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 AP5S1Q9NUS5 200 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 MAT2BQ9NZL9 334 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 SEMA5BQ9P283 1151 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 FBXL7Q9UJT9 491 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 TCFL5Q9UL49 500 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 SATB2Q9UPW6 733 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 WDR45Q9Y484 360 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 GMPPBQ9Y5P6 360 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 KCNE3Q9Y6H6 103 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 RP1P56715 2156 aa6.3□□□□□ -1.4
SLIRP-204ENST00000555890 DSPPQ9NZW4 1301 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 PMS2P1A4D2B8 440 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 SYNDIG1LA6NDD5 238 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 A8MU76 341 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 TMEM150CB9EJG8 249 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 J3KTA2 159 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 FAAHO00519 579 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 AP3D1O14617 1153 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 PCDH17O14917 1159 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF749O43361 778 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 DYRK3O43781 588 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 STX11O75558 287 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 CPNE6O95741 557 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 AMY2AP04746 511 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 TFAP2AP05549 437 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 DBIP07108 87 aaKnown RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 GUSBP08236 651 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 LINGO3P0C6S8 592 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 MSL3P1P0C860 447 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 ACP2P11117 423 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 IL7RP16871 459 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 AMY2BP19961 511 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 EEF1B2P24534 225 aaKnown RBP6.29□□□□□ -1.4
SLIRP-204ENST00000555890 ACP1P24666 158 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 CD40P25942 277 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 IFNGR2P38484 337 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 STT3AP46977 705 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 LIMS1P48059 325 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 HLCSP50747 726 aa6.29□□□□□ -1.4
SLIRP-204ENST00000555890 DUSP3P51452 185 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms