RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SLC37A3Q8NCC5 494 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 OR4M2Q8NGB6 313 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 PFN4Q8NHR9 129 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SLC2A12Q8TD20 617 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 AKAP1Q92667 903 aaKnown RBP eCLIP6.49□□□□□ -1.37
TDP1-213ENST00000555880 GFM1Q96RP9 751 aaKnown RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 UBL7Q96S82 380 aaPredicted RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 STACQ99469 402 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 PRSS27Q9BQR3 290 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 IGFLR1Q9H665 355 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SYNPO2LQ9H987 977 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 FBRSQ9HAH7 460 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 FOLH1BQ9HBA9 442 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 KLHL1Q9NR64 748 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 POLE3Q9NRF9 147 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 CYSLTR2Q9NS75 346 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 CLDND1Q9NY35 253 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 TEKT2Q9UIF3 430 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 KLF15Q9UIH9 416 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ZNF223Q9UK11 482 aaPredicted RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 SLC35A3Q9Y2D2 325 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SLC22A7Q9Y694 548 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 MAU2Q9Y6X3 613 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SCN2AQ99250 2005 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ATG2BQ96BY7 2078 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 CHD7Q9P2D1 2997 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 LOC102723532A0A0G2JNH3 316 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 SHISA3A0PJX4 238 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 CDHR4A6H8M9 788 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 A6NL46 340 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 PLOD3O60568 738 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 REM1O75628 298 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 SOX30O94993 753 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 DHFRP00374 187 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 ATP1B1P05026 303 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 HOXC4P09017 264 aaPredicted RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 PRG2P13727 222 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 ARSBP15848 533 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 UGT2B7P16662 529 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 HK1P19367 917 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 NTSR1P30989 418 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 SLC6A6P31641 620 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 ACTR1BP42025 376 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 RFX3P48380 749 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 SOX9P48436 509 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 ACTR1AP61163 376 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 BTG1P62324 171 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 POU6F2P78424 691 aaPredicted RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 SHC2P98077 582 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 FOXK2Q01167 660 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 ID2Q02363 134 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 SLC3A1Q07837 685 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 GAS6Q14393 721 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 RAB30Q15771 203 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 TRMT12Q53H54 448 aaKnown RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 PRRT3Q5FWE3 981 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 FAM109BQ6ICB4 259 aaPredicted RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 SFXN4Q6P4A7 337 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 ARHGAP11AQ6P4F7 1023 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 ZNF613Q6PF04 617 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 B3GLCTQ6Y288 498 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 DGLUCYQ7Z3D6 616 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 CEACAM19Q7Z692 300 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 SLC43A2Q8N370 569 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 MS4A15Q8N5U1 240 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 NLGN4YQ8NFZ3 816 aaPredicted RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 OR13C2Q8NGS9 318 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 OR10G6Q8NH81 332 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 UPRTQ96BW1 309 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 TM4SF19Q96DZ7 209 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 MRPL48Q96GC5 212 aaKnown RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 SENP5Q96HI0 755 aaPredicted RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 AHCYL2Q96HN2 611 aaKnown RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 WDR92Q96MX6 357 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 OR2A5Q96R48 311 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 TEAD3Q99594 435 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 GDF15Q99988 308 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 KXD1Q9BQD3 176 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 THAP7Q9BT49 309 aaPredicted RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 TRAF4Q9BUZ4 470 aaPredicted RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 YIPF2Q9BWQ6 316 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 GTPBP2Q9BX10 602 aaKnown RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 OR51V1Q9H2C8 321 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 SLC28A3Q9HAS3 691 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 ENAMQ9NRM1 1142 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 PLSCR3Q9NRY6 295 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 C20orf141Q9NUB4 165 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 MCUBQ9NWR8 336 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 STMN3Q9NZ72 180 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 ZNF624Q9P2J8 865 aaPredicted RBP6.48□□□□□ -1.37
TDP1-213ENST00000555880 RASD1Q9Y272 281 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 NCKAP1Q9Y2A7 1128 aa6.48□□□□□ -1.37
TDP1-213ENST00000555880 CENPVL1A0A0U1RR11 272 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ZC3H12DA2A288 527 aaKnown RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 OR6C74A6NCV1 312 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 SYNDIG1LA6NDD5 238 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ZNF860A6NHJ4 632 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 J3QLW9 94 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms