RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 LGI1O95970 557 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 DBIP07108 87 aaKnown RBP9.93□□□□□ -0.82
SHMT2-218ENST00000555213 FESP07332 822 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 NPIPA8P0DM63 369 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 UBL4AP11441 157 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 RPS4Y1P22090 263 aaKnown RBP9.93□□□□□ -0.82
SHMT2-218ENST00000555213 MSX1P28360 303 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 VHLP40337 213 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 MAGEA5P43359 124 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 OR1E2P47887 323 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 IST1P53990 364 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 GAS1P54826 345 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 SUMO3P55854 103 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-218ENST00000555213 PLAURQ03405 335 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF141Q15928 474 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 LIN52Q52LA3 116 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 KLHL26Q53HC5 615 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 RNFT1Q5M7Z0 435 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 PDZK1Q5T2W1 519 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF324BQ6AW86 544 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-218ENST00000555213 ARHGAP11AQ6P4F7 1023 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 GFRALQ6UXV0 394 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 TSPYL5Q86VY4 417 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-218ENST00000555213 RBM45Q8IUH3 476 aaKnown RBP9.93□□□□□ -0.82
SHMT2-218ENST00000555213 ARMC8Q8IUR7 673 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 EPHX4Q8IUS5 362 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 LACC1Q8IV20 430 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 ZDHHC21Q8IVQ6 265 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 SIAH3Q8IW03 269 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 CMIPQ8IY22 773 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 GHDCQ8N2G8 530 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 TMCO5AQ8N6Q1 288 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 GATSQ8NAP1 163 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 ST6GALNAC3Q8NDV1 305 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 PHOSPHO1Q8TCT1 267 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 GPR137Q96N19 417 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 BARD1Q99728 777 aaKnown RBP9.93□□□□□ -0.82
SHMT2-218ENST00000555213 SPATA5L1Q9BVQ7 753 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 LDAHQ9H6V9 325 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 ZDHHC11Q9H8X9 412 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 ADPRHL2Q9NX46 363 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 DNAJB9Q9UBS3 223 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 SLC35A3Q9Y2D2 325 aa9.93□□□□□ -0.82
SHMT2-218ENST00000555213 MAGED1Q9Y5V3 778 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-218ENST00000555213 IGLV3-32A0A0A0MS00 114 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 C7orf72A4D263 438 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 C2orf72A6NCS6 295 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 AGAP5A6NIR3 686 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 hCG_2039718K7EN88 272 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 FFAR1O14842 300 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 UGT2B17O75795 530 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 PDE9AO76083 593 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 DIRAS1O95057 198 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 CSTAP01040 98 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 IFNA14P01570 189 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 PABPC4LP0CB38 370 aaKnown RBP9.92□□□□□ -0.82
SHMT2-218ENST00000555213 UQCRBP14927 111 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 IL7RP16871 459 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 MST1P26927 711 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 SRD5A2P31213 254 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF41P51814 821 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-218ENST00000555213 PPP1R8Q12972 351 aaKnown RBP9.92□□□□□ -0.82
SHMT2-218ENST00000555213 SLC10A1Q14973 349 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 LARS2Q15031 903 aaKnown RBP9.92□□□□□ -0.82
SHMT2-218ENST00000555213 TRIP10Q15642 601 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 ZSWIM7Q19AV6 140 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 LRRC36Q1X8D7 754 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 IFI44LQ53G44 452 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 CMPK2Q5EBM0 449 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 FNDC7Q5VTL7 733 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 ANKRD34AQ69YU3 496 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 OR5M10Q6IEU7 315 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 PPP4R4Q6NUP7 873 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 VRK2Q86Y07 508 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 CLIP4Q8N3C7 705 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 WDSUB1Q8N9V3 476 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 GALNT11Q8NCW6 608 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 OR14L1PQ8NHC6 308 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 B4GALNT2Q8NHY0 566 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 DUSP19Q8WTR2 217 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 MIB2Q96AX9 1013 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 SH3YL1Q96HL8 342 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-218ENST00000555213 GNRHR2Q96P88 292 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF607Q96SK3 696 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF232Q9UNY5 417 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 IFT52Q9Y366 437 aa9.92□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF462Q96JM2 2506 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 A0A087WZY1 265 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 TRGV5A0A0B4J1U4 118 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 ANKUB1A6NFN9 424 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 CLDN24A6NM45 220 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 J3KTA2 159 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 PDLIM1O00151 329 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 SOCS2O14508 198 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF264O43296 627 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 EIF4E2O60573 245 aaKnown RBP9.91□□□□□ -0.82
SHMT2-218ENST00000555213 HCN1O60741 890 aa9.91□□□□□ -0.82
SHMT2-218ENST00000555213 BCAS1O75363 584 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-218ENST00000555213 SERPINB7O75635 380 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms