RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LRRC23Q53EV4 343 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 CEP55Q53EZ4 464 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 RNLSQ5VYX0 342 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 TPGS2Q68CL5 300 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 TMEM225Q6GV28 225 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 FAM71F2Q6NXP2 309 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 FAHD2BQ6P2I3 314 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 CCDC80Q76M96 950 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 CLDN19Q8N6F1 224 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 CD177Q8N6Q3 437 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 PAQR8Q8TEZ7 354 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 SHC3Q92529 594 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 N4BP2L2Q92802 583 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 EMG1Q92979 244 aaKnown RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 SLC25A38Q96DW6 304 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 FAHD2AQ96GK7 314 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 TGM7Q96PF1 710 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 CCNL2Q96S94 520 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 SECISBP2Q96T21 854 aaKnown RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 CCT7Q99832 543 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 CAPS2Q9BXY5 557 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 CHIAQ9BZP6 476 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 NT5C3AQ9H0P0 336 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 PPDPFQ9H3Y8 114 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 Q9UF83 564 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 PCSK1NQ9UHG2 260 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 MAB21L2Q9Y586 359 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 ZNF705EA8MWA4 302 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-213ENST00000554776 FAM220BPB1ANY3 271 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 RS1O15537 224 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 NUDT21O43809 227 aaKnown RBP2.32□□□□□ -2.04
SCFD1-213ENST00000554776 N4BP1O75113 896 aaKnown RBP2.32□□□□□ -2.04
SCFD1-213ENST00000554776 GIG44P09565 113 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-213ENST00000554776 H2AFZP0C0S5 128 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 OR8U8P0C7N1 319 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 PNMTP11086 282 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 CYP2B6P20813 491 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 OR3A4PP47883 348 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 CASP4P49662 377 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 TNFRSF17Q02223 184 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 FGL1Q08830 312 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 RIPPLY1Q0D2K3 151 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 C1orf61Q13536 156 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 RIPK1Q13546 671 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 ZMYND11Q15326 602 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 TRIM16LQ309B1 348 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 SLC25A52Q3SY17 297 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 UQCC3Q6UW78 93 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 C2orf66Q6UXQ4 117 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 MOB3BQ86TA1 216 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 LCA5Q86VQ0 697 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 TPRA1Q86W33 373 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 ZNF677Q86XU0 584 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 MTURNQ8N3F0 131 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 SYT14Q8NB59 555 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 OR5D13Q8NGL4 314 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 IL1F10Q8WWZ1 152 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 FAF2Q96CS3 445 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 HAVCR1Q96D42 359 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 CITED1Q99966 193 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 DPH7Q9BTV6 452 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 GCOM2Q9BZD3 368 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-213ENST00000554776 RHBGQ9H310 441 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 APMAPQ9HDC9 416 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 FANCFQ9NPI8 374 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 UFSP2Q9NUQ7 469 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 PIPOXQ9P0Z9 390 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 WRAP73Q9P2S5 460 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-213ENST00000554776 SPRR3Q9UBC9 169 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 ZNF107Q9UII5 783 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-213ENST00000554776 HPCAL4Q9UM19 191 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 RPH3ALQ9UNE2 315 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 SAMD4AQ9UPU9 718 aaKnown RBP2.32□□□□□ -2.04
SCFD1-213ENST00000554776 RRP15Q9Y3B9 282 aaKnown RBP2.32□□□□□ -2.04
SCFD1-213ENST00000554776 ASB3Q9Y575 518 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 TIMM10BQ9Y5J6 103 aa2.32□□□□□ -2.04
SCFD1-213ENST00000554776 CROCCQ5TZA2 2017 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 IGKV6D-41A0A0C4DH26 115 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 IGHV2-70DA0A0C4DH43 119 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 TRIM64CA6NLI5 447 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 PP2D1A8MPX8 630 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 K7ENP7 123 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 SULT2B1O00204 365 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 FOXE1O00358 373 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-213ENST00000554776 CXCL11O14625 94 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 PHOX2AO14813 284 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 RGS16O15492 202 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-213ENST00000554776 H2BFMP0C1H6 154 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 KRTAP1-4P0C5Y4 121 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 PBLDP30039 288 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-213ENST00000554776 RPL32P62910 135 aaKnown RBP2.31□□□□□ -2.04
SCFD1-213ENST00000554776 BCL2L1Q07817 233 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 SPATA46Q5T0L3 261 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 PDZK1Q5T2W1 519 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 OR4F3Q6IEY1 312 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 CXCL17Q6UXB2 119 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 FBXO16Q8IX29 292 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-213ENST00000554776 CATSPER1Q8NEC5 780 aa2.31□□□□□ -2.04
SCFD1-213ENST00000554776 OR10A7Q8NGE5 316 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms