RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 KIAA1143Q96AT1 154 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-211ENST00000554437 NTNG2Q96CW9 530 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 TRIM9Q9C026 710 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 BLZF1Q9H2G9 400 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 DHX33Q9H6R0 707 aaKnown RBP3.86□□□□□ -1.79
SCFD1-211ENST00000554437 KAT8Q9H7Z6 458 aaKnown RBP3.86□□□□□ -1.79
SCFD1-211ENST00000554437 RAB18Q9NP72 206 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 ZNF446Q9NWS9 450 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 PDP1Q9P0J1 537 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-211ENST00000554437 PIPOXQ9P0Z9 390 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 PACSIN2Q9UNF0 486 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-211ENST00000554437 CA5BQ9Y2D0 317 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 SLC6A5Q9Y345 797 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 WDR45Q9Y484 360 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 V9GYY5 206 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-211ENST00000554437 NINLQ9Y2I6 1382 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 KIF27Q86VH2 1401 aa3.86□□□□□ -1.79
SCFD1-211ENST00000554437 TRAV9-2A0A087WT02 112 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 PPIAL4CA0A0B4J2A2 164 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 ESYT2A0FGR8 921 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 OR6C74A6NCV1 312 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 SNTNA6NMZ2 147 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 TIMM8AO60220 97 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 TSPAN2O60636 221 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 SRPX2O60687 465 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 ZNF253O75346 499 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 UPK3AO75631 287 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 PIGRP01833 764 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 IGHG3P01860 377 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 THY1P04216 161 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 PPIAL4GP0DN37 164 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 NT5EP21589 574 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 UCP1P25874 307 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 MAGEA8P43361 318 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 IST1P53990 364 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 C21orf59P57076 290 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 PPIAP62937 165 aaKnown RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 HERVK_113P63132 956 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 ERVK-8P63133 956 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 ENPEPQ07075 957 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 MERTKQ12866 999 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 CLPPQ16740 277 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 Q1RN00 199 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 C17orf58Q2M2W7 97 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 HIKESHIQ53FT3 197 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 XKR7Q5GH72 579 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 ATAD3CQ5T2N8 411 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 AGBL2Q5U5Z8 902 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 PDPK2PQ6A1A2 396 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 STEAP1BQ6NZ63 245 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 BAIAP2L2Q6UXY1 529 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 DPY19L4Q7Z388 723 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 TGIF2LXQ8IUE1 241 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 LINC00518Q8N0U6 118 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 TMEM123Q8N131 208 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 CSGALNACT2Q8N6G5 542 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 CEP112Q8N8E3 955 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 ZNF491Q8N8L2 437 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 WDR36Q8NI36 951 aaKnown RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 M1APQ8TC57 530 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 RPL3LQ92901 407 aaKnown RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 AKR1E2Q96JD6 320 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 TSNARE1Q96NA8 513 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 FAM210AQ96ND0 272 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 MCCC1Q96RQ3 725 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 ERVK-6Q9BXR3 956 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 RNF41Q9H4P4 317 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 GEMIN7Q9H840 131 aaKnown RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 Q9HAA7 133 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 LPAR2Q9HBW0 351 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 ZNF160Q9HCG1 818 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 ABCC13Q9NSE7 274 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 UFSP2Q9NUQ7 469 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 MRPL22Q9NWU5 206 aaKnown RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 UBAP1Q9NZ09 502 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 RCOR3Q9P2K3 495 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-211ENST00000554437 PISDQ9UG56 409 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 MIOXQ9UGB7 285 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 LCMT1Q9UIC8 334 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 ANGPTL2Q9UKU9 493 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 RPH3ALQ9UNE2 315 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 RNF24Q9Y225 148 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 RNF115Q9Y4L5 304 aa3.85□□□□□ -1.79
SCFD1-211ENST00000554437 C9JVG2 144 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 H3BTX0 84 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 TRDMT1O14717 391 aaKnown RBP3.84□□□□□ -1.79
SCFD1-211ENST00000554437 STX7O15400 261 aaKnown RBP3.84□□□□□ -1.79
SCFD1-211ENST00000554437 TPST2O60704 377 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 ZNF254O75437 659 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 GNA14O95837 355 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 FCER2P06734 321 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 UQCRBP14927 111 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 MSR1P21757 451 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 HMGCLP35914 325 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 CCT3P49368 545 aaKnown RBP3.84□□□□□ -1.79
SCFD1-211ENST00000554437 HMGCS2P54868 508 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 RGS8P57771 180 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-211ENST00000554437 NAAAQ02083 359 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 BNIP1Q12981 228 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 SYPL1Q16563 259 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms