RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 MIEF1Q9NQG6 463 aa3.89□□□□□ -1.79
CHD8-207ENST00000554384 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD8-207ENST00000554384 TMOD2Q9NZR1 351 aa3.89□□□□□ -1.79
CHD8-207ENST00000554384 ZNF107Q9UII5 783 aaPredicted RBP3.89□□□□□ -1.79
CHD8-207ENST00000554384 LAMP5Q9UJQ1 280 aa3.89□□□□□ -1.79
CHD8-207ENST00000554384 BLOC1S6Q9UL45 172 aa3.89□□□□□ -1.79
CHD8-207ENST00000554384 FER1L6Q2WGJ9 1857 aa3.89□□□□□ -1.79
CHD8-207ENST00000554384 ABCA7Q8IZY2 2146 aa3.89□□□□□ -1.79
CHD8-207ENST00000554384 LAMB4A4D0S4 1761 aa3.89□□□□□ -1.79
CHD8-207ENST00000554384 PRUNE2Q8WUY3 3088 aa3.89□□□□□ -1.79
CHD8-207ENST00000554384 TRPM7Q96QT4 1865 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 DICER1Q9UPY3 1922 aaKnown RBP3.88□□□□□ -1.79
CHD8-207ENST00000554384 MON2Q7Z3U7 1717 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 LAMA2P24043 3122 aaKnown RBP3.88□□□□□ -1.79
CHD8-207ENST00000554384 ESYT2A0FGR8 921 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 PHOX2AO14813 284 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 CLDN3O15551 220 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 LATO43561 262 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 TM7SF2O76062 418 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 GJB5O95377 273 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 EPB41P11171 864 aaKnown RBP3.88□□□□□ -1.79
CHD8-207ENST00000554384 PGAM2P15259 253 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 PAX7P23759 505 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 IGFBP5P24593 272 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 FASP25445 335 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 CDH5P33151 784 aaPredicted RBP3.88□□□□□ -1.79
CHD8-207ENST00000554384 ACAA2P42765 397 aaKnown RBP3.88□□□□□ -1.79
CHD8-207ENST00000554384 ELP6Q0PNE2 266 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 ZNF239Q16600 458 aaKnown RBP3.88□□□□□ -1.79
CHD8-207ENST00000554384 ATAD3CQ5T2N8 411 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 LGSNQ5TDP6 509 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 RNLSQ5VYX0 342 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 NCR3LG1Q68D85 454 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 STAC2Q6ZMT1 411 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 HSD11B1LQ7Z5J1 315 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 MCOLN2Q8IZK6 566 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 CENPLQ8N0S6 344 aaPredicted RBP3.88□□□□□ -1.79
CHD8-207ENST00000554384 BPIFB2Q8N4F0 458 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 KLHL30-AS1Q8NEE0 82 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 OR2T33Q8NG76 320 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 PINX1Q96BK5 328 aaKnown RBP3.88□□□□□ -1.79
CHD8-207ENST00000554384 PPP1R16AQ96I34 528 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 CASD1Q96PB1 797 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 CDX2Q99626 313 aaPredicted RBP3.88□□□□□ -1.79
CHD8-207ENST00000554384 NFKBIZQ9BYH8 718 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 IKZF5Q9H5V7 419 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 MEAF6Q9HAF1 191 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 SLC7A10Q9NS82 523 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 Q9UF83 564 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 XPO7Q9UIA9 1087 aaKnown RBP3.88□□□□□ -1.79
CHD8-207ENST00000554384 NAALAD2Q9Y3Q0 740 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 PIEZO1Q92508 2521 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 SLX4Q8IY92 1834 aa3.88□□□□□ -1.79
CHD8-207ENST00000554384 DLEC1Q9Y238 1755 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 TRIM49BA6NDI0 452 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 JAK2O60674 1132 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 STX11O75558 287 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 NEBLO76041 1014 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 CHRNA1P02708 482 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 GIG44P09565 113 aaPredicted RBP3.87□□□□□ -1.79
CHD8-207ENST00000554384 CT45A10P0DMU9 189 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 HSPA5P11021 654 aaKnown RBP3.87□□□□□ -1.79
CHD8-207ENST00000554384 TNNI3P19429 210 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 DRD5P21918 477 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 NAPAP54920 295 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 DCAF4L1Q3SXM0 396 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 CYBRD1Q53TN4 286 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 TMEM41BQ5BJD5 291 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 SLC25A30Q5SVS4 291 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 CGB2Q6NT52 195 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 TMEM184AQ6ZMB5 413 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 CENPUQ71F23 418 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 SERINC5Q86VE9 423 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 P2RY8Q86VZ1 359 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 ERICH1Q86X53 443 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 SLC39A11Q8N1S5 342 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 LINC01561Q8N1V8 128 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 CD177Q8N6Q3 437 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 FADS6Q8N9I5 356 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 CCDC26Q8TAB7 109 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 NANPQ8TBE9 248 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 ARNTL2Q8WYA1 636 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 SYAP1Q96A49 352 aaPredicted RBP3.87□□□□□ -1.79
CHD8-207ENST00000554384 DCPSQ96C86 337 aaKnown RBP3.87□□□□□ -1.79
CHD8-207ENST00000554384 TSSK1BQ9BXA7 367 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 GRIN2DO15399 1336 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 EVC2Q86UK5 1308 aa3.87□□□□□ -1.79
CHD8-207ENST00000554384 LTN1O94822 1766 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 SAGE2PA6NJ88 616 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 ERI2A8K979 691 aaKnown RBP3.86□□□□□ -1.79
CHD8-207ENST00000554384 SLC17A2O00624 439 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 STX7O15400 261 aaKnown RBP3.86□□□□□ -1.79
CHD8-207ENST00000554384 KRT6BP04259 564 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 ASNSP08243 561 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 GDF1P27539 372 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 PTGER3P43115 390 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 KRT6CP48668 564 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 OSTNP61366 133 aa3.86□□□□□ -1.79
CHD8-207ENST00000554384 RPL8P62917 257 aaKnown RBP3.86□□□□□ -1.79
CHD8-207ENST00000554384 ST3GAL3Q11203 375 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms