RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 NPAS2Q99743 824 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 PINK1Q9BXM7 581 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 ALG9Q9H6U8 611 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 WDR41Q9HAD4 459 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 EFCAB1Q9HAE3 211 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 POPDC3Q9HBV1 291 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 TRPC7Q9HCX4 862 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 GTSE1Q9NYZ3 720 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 OR6C2Q9NZP2 312 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 CD300AQ9UGN4 299 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 RIMS3Q9UJD0 308 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 CDC14AQ9UNH5 594 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 PAM16Q9Y3D7 125 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 THADAQ6YHU6 1953 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 PI4KAP42356 2102 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 ABCA7Q8IZY2 2146 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 USP24Q9UPU5 2620 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 KIAA1549LQ6ZVL6 1849 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 A0A1B0GTQ1 180 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ILVBLA1L0T0 632 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ZNF840PA6NDX5 716 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 OR6C65A6NJZ3 312 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 MAGEB17A8MXT2 336 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 F5H5T6 163 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 PSMD12O00232 456 aaPredicted RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 TIMM23O14925 209 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 CFLARO15519 480 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 COCHO43405 550 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 RGS14O43566 566 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 DENRO43583 198 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 SPRY3O43610 288 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 PDE9AO76083 593 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 CSTAP01040 98 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 CRYABP02511 175 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 SERPINF2P08697 491 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 PRKAR1AP10644 381 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 CDK4P11802 303 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 RPA2P15927 270 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 CKMT2P17540 419 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 TSPAN8P19075 237 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ME2P23368 584 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 GABRR2P28476 465 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 CSTF2P33240 577 aaKnown RBP eCLIP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 CXCL12P48061 93 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 STC1P52823 247 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 SUCLG1P53597 346 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 CDH4P55283 916 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 CDH13P55290 713 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 FOXA1P55317 472 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 PSME3P61289 254 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 RPS24P62847 133 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 HERVK_113P63132 956 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 TUBA1BP68363 451 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ADORA2A-AS1P86434 159 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 FCHO2Q0JRZ9 810 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 FASTKQ14296 549 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ZNF235Q14590 738 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 TAF1AQ15573 450 aaPredicted RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 IQCCQ4KMZ1 466 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 GPAT3Q53EU6 434 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 AGKQ53H12 422 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 DCST1Q5T197 706 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 REP15Q6BDI9 236 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 CLEC6AQ6EIG7 209 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 TYW3Q6IPR3 259 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 BRAT1Q6PJG6 821 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 NHLRC1Q6VVB1 395 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 HACD2Q6Y1H2 254 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 TUBA1AQ71U36 451 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 EFL1Q7Z2Z2 1120 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 PRSS42Q7Z5A4 293 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ADAMTSL2Q86TH1 951 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 BIVMQ86UB2 503 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 RTN4RL2Q86UN3 420 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 TMEM126BQ8IUX1 230 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 SIAH3Q8IW03 269 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 OR10S1Q8NGN2 331 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 OR14L1PQ8NHC6 308 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 RHEBL1Q8TAI7 183 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 BLOC1S5Q8TDH9 187 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ASB5Q8WWX0 329 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ROBO4Q8WZ75 1007 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 DUS3LQ96G46 650 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 BIRC8Q96P09 236 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 BTBD9Q96Q07 612 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 COQ7Q99807 217 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ASCL2Q99929 193 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 FAM110AQ9BQ89 295 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 PIGQQ9BRB3 760 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 KATNB1Q9BVA0 655 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ERVK-6Q9BXR3 956 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 MRPL37Q9BZE1 423 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 DERL2Q9GZP9 239 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 ATG10Q9H0Y0 220 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 TUBB1Q9H4B7 451 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 NOL11Q9H8H0 719 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 METTL7AQ9H8H3 244 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 EVA1AQ9H8M9 152 aa4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 EML4Q9HC35 981 aaKnown RBP4.77□□□□□ -1.65
MTHFD1-206ENST00000554353 SLC52A3Q9NQ40 469 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms