RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 COX6A1P12074 109 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 UQCRBP14927 111 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 RHCEP18577 417 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 TBXA2RP21731 343 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 AQP1P29972 269 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 RRM2P31350 389 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 PTGER1P34995 402 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 RFX3P48380 749 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 KCNJ10P78508 379 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 PLCXD2Q0VAA5 305 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 CHAF1BQ13112 559 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 AIMP2Q13155 320 aaKnown RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 EBPQ15125 230 aaKnown RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 MEP1AQ16819 746 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 DUSP7Q16829 419 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 TBC1D25Q3MII6 688 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 PRR31Q5SQ13 230 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 RNF220Q5VTB9 566 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 FAM69BQ5VUD6 431 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 OR2T5Q6IEZ7 315 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 TYW3Q6IPR3 259 aaKnown RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 KIRREL2Q6UWL6 708 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 ENPP6Q6UWR7 440 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 FRRS1Q6ZNA5 592 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 RRM2BQ7LG56 351 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 RANBP3LQ86VV4 465 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 RPS19BP1Q86WX3 136 aaKnown RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 HIPK1Q86Z02 1210 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 GRAMD2AQ8IUY3 354 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 C9orf40Q8IXQ3 194 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 GPALPP1Q8IXQ4 340 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 ADGRG5Q8IZF4 528 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 PQLC1Q8N2U9 271 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 C10orf111Q8N326 155 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 SVOPLQ8N434 492 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 SLC5A8Q8N695 610 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 CLEC1AQ8NC01 280 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 APCDD1LQ8NCL9 501 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 PIK3C3Q8NEB9 887 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 TOR1AIP2Q8NFQ8 470 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 OR2T29Q8NH02 315 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 OR5K1Q8NHB7 308 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 KISS1RQ969F8 398 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 C8orf44Q96CB5 159 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 NRBF2Q96F24 287 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 OTUB1Q96FW1 271 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 C1orf159Q96HA4 380 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 C9orf16Q9BUW7 83 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 SSBP3Q9BWW4 388 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 DPH1Q9BZG8 443 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 NXF5Q9H1B4 397 aaKnown RBP4.6□□□□□ -1.67
VTI1B-202ENST00000553619 SERHL2Q9H4I8 314 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 CDCP1Q9H5V8 836 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 REEP1Q9H902 201 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 TMEM27Q9HBJ8 222 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 ASCL3Q9NQ33 180 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 DLL4Q9NR61 685 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 P4HTMQ9NXG6 502 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 SELENONQ9NZV5 590 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 ASH2LQ9UBL3 628 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 RPS6KB2Q9UBS0 482 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 TMCC3Q9ULS5 477 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 SH3GLB1Q9Y371 365 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 MSRB2Q9Y3D2 182 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 DTNAQ9Y4J8 743 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 HS3ST3B1Q9Y662 390 aa4.6□□□□□ -1.67
VTI1B-202ENST00000553619 HTR3EA5X5Y0 456 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 SERINC4A6NH21 518 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF891A8MT65 544 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 FAM47E-STBD1D6RA91 191 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 H0YJX3 145 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 WWP2O00308 870 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 CASQ2O14958 399 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 PEX1O43933 1283 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 KIAA0513O60268 411 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 TSPAN2O60636 221 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 FMO6PO60774 539 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 E2F6O75461 281 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 GCM2O75603 506 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-202ENST00000553619 TIPRLO75663 272 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 UGT2B17O75795 530 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 DNAJB5O75953 348 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 GADD45GO95257 159 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 UTS2O95399 124 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 CSTAP01040 98 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 C1QCP02747 245 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 OPN1SWP03999 348 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 CLPSP04118 112 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 NGFRP08138 427 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 THRBP10828 461 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ANXA8P13928 327 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 IFNGR2P38484 337 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 DCTP40126 519 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 VHLP40337 213 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 CASRP41180 1078 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 MAGEA2P43356 314 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 ID4P47928 161 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 SLC6A8P48029 635 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 SSR4P51571 173 aa4.59□□□□□ -1.67
VTI1B-202ENST00000553619 RGS8P57771 180 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms