RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TRDNQ13061 729 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 CDC37Q16543 378 aaPredicted RBP4.35□□□□□ -1.71
PCNX1-205ENST00000553508 IMMTQ16891 758 aaKnown RBP4.35□□□□□ -1.71
PCNX1-205ENST00000553508 MEDAGQ5VYS4 303 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 RANBP3LQ86VV4 465 aaPredicted RBP4.35□□□□□ -1.71
PCNX1-205ENST00000553508 CENPSQ8N2Z9 138 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 C10orf53Q8N6V4 93 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 ZNF799Q96GE5 643 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 DPH7Q9BTV6 452 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 KRT23Q9C075 422 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 C2orf40Q9H1Z8 148 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 LHX3Q9UBR4 397 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 PURGQ9UJV8 347 aaKnown RBP4.35□□□□□ -1.71
PCNX1-205ENST00000553508 BARX2Q9UMQ3 279 aaPredicted RBP4.35□□□□□ -1.71
PCNX1-205ENST00000553508 NOL7Q9UMY1 257 aaKnown RBP4.35□□□□□ -1.71
PCNX1-205ENST00000553508 FKBP7Q9Y680 259 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 MTCH2Q9Y6C9 303 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 GRIN2DO15399 1336 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 SCN10AQ9Y5Y9 1956 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 SPTBN5Q9NRC6 3674 aaKnown RBP4.34□□□□□ -1.71
PCNX1-205ENST00000553508 A0A0D9SFI3 127 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 ERICH2A1L162 156 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 H3BMH7 237 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 IGLV1-47P01700 117 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 H2AFZP0C0S5 128 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 SDC1P18827 310 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 TMOD1P28289 359 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 MARCKSP29966 332 aaPredicted RBP4.34□□□□□ -1.71
PCNX1-205ENST00000553508 CCND2P30279 289 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 CCL11P51671 97 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 GNB2P62879 340 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 TMEM31Q5JXX7 168 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 SCARA5Q6ZMJ2 495 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 CCDC91Q7Z6B0 441 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 ZNF410Q86VK4 478 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 CHCHD4Q8N4Q1 142 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 PPTC7Q8NI37 304 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 RNF138Q8WVD3 245 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 MARC2Q969Z3 335 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 TGS1Q96RS0 853 aaKnown RBP4.34□□□□□ -1.71
PCNX1-205ENST00000553508 TMEM245Q9H330 911 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 RWDD1Q9H446 243 aaPredicted RBP4.34□□□□□ -1.71
PCNX1-205ENST00000553508 EXOSC3Q9NQT5 275 aaKnown RBP4.34□□□□□ -1.71
PCNX1-205ENST00000553508 FAM153AQ9UHL3 310 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 PDE10AQ9Y233 779 aa4.34□□□□□ -1.71
PCNX1-205ENST00000553508 COL4A4P53420 1690 aaPredicted RBP4.34□□□□□ -1.71
PCNX1-205ENST00000553508 ZFHX2Q9C0A1 2572 aaPredicted RBP4.33□□□□□ -1.72
PCNX1-205ENST00000553508 GBF1Q92538 1859 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 LAMA4Q16363 1823 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 TRBV7-9A0A0J9YWB2 115 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 MACROD2A1Z1Q3 448 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 PANO1I0J062 215 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 ARPC1BO15143 372 aaKnown RBP4.33□□□□□ -1.72
PCNX1-205ENST00000553508 EMC8O43402 210 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 NME2P1O60361 137 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 LRP3O75074 770 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 CXCL10P02778 98 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 ZNF286BP0CG31 522 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 GOLGA8HP0CJ92 632 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 ZP3P21754 424 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 UGT1A3P35503 534 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 UCNP55089 124 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 CASP9P55211 416 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 PPP1R8Q12972 351 aaKnown RBP4.33□□□□□ -1.72
PCNX1-205ENST00000553508 PSMA8Q8TAA3 256 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 ZNF560Q96MR9 790 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 TSPAN18Q96SJ8 248 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 HES7Q9BYE0 225 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 MEPEQ9NQ76 525 aaPredicted RBP4.33□□□□□ -1.72
PCNX1-205ENST00000553508 PXMP2Q9NR77 195 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 STARD5Q9NSY2 213 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 DDX49Q9Y6V7 483 aaKnown RBP4.33□□□□□ -1.72
PCNX1-205ENST00000553508 CHD7Q9P2D1 2997 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 LCTP09848 1927 aa4.33□□□□□ -1.72
PCNX1-205ENST00000553508 SPTBN4Q9H254 2564 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 PRUNE2Q8WUY3 3088 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 RSPH10B2B2RC85 870 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 PDXKO00764 312 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 ZBTB5O15062 677 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 RTN2O75298 545 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 HOXC4P09017 264 aaPredicted RBP4.32□□□□□ -1.72
PCNX1-205ENST00000553508 RSPH10BP0C881 870 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 POLR2MP0CAP2 368 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 CYP11B1P15538 503 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 KIF5BP33176 963 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 CTNNA1P35221 906 aaKnown RBP4.32□□□□□ -1.72
PCNX1-205ENST00000553508 RIPPLY3P57055 190 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 GTF3C1Q12789 2109 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 PSG7Q13046 419 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 MORF4L2Q15014 288 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 RAB35Q15286 201 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 PNCKQ6P2M8 343 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 TIFABQ6ZNK6 161 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 FAM43BQ6ZT52 329 aaPredicted RBP4.32□□□□□ -1.72
PCNX1-205ENST00000553508 ZNF589Q86UQ0 364 aaPredicted RBP4.32□□□□□ -1.72
PCNX1-205ENST00000553508 ERI1Q8IV48 349 aaKnown RBP4.32□□□□□ -1.72
PCNX1-205ENST00000553508 C9orf40Q8IXQ3 194 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 MYOCDQ8IZQ8 938 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 ATP6V0A1Q93050 837 aa4.32□□□□□ -1.72
PCNX1-205ENST00000553508 MRPL38Q96DV4 380 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms