RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SPATA9Q9BWV2 254 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 MYLK2Q9H1R3 596 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 DNAJB12Q9NXW2 375 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 STOML1Q9UBI4 398 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF443Q9Y2A4 671 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 CRYBG3Q68DQ2 2970 aa10.58□□□□□ -0.72
TRAFD1-209ENST00000552896 SETXQ7Z333 2677 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 CDHR4A6H8M9 788 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 CD8B2A6NJW9 211 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 CLDN24A6NM45 220 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 SHISA8B8ZZ34 492 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 SHOX2O60902 331 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 BCAS1O75363 584 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 CYP7B1O75881 506 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 EPPINO95925 133 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 GLI4P10075 376 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 IL7RP16871 459 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 PRKCAP17252 672 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 ME2P23368 584 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 STARP49675 285 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 DLX5P56178 289 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 EEFSECP57772 596 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 CDK6Q00534 326 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 RBBP4Q09028 425 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 SCARB2Q14108 478 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 SELPLGQ14242 412 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 CAPRIN1Q14444 709 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 LARS2Q15031 903 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 QPRTQ15274 297 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 ADRM1Q16186 407 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 ZSWIM7Q19AV6 140 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 MRPL2Q5T653 305 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 RIPPLY2Q5TAB7 128 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF836Q6ZNA1 936 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 HMGN2P46Q86SG4 172 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 MRGPRGQ86SM5 289 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 SERPINA11Q86U17 422 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 GGNQ86UU5 652 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 KRT73Q86Y46 540 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 PTOV1Q86YD1 416 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 GRAMD2AQ8IUY3 354 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF440Q8IYI8 595 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 MEIOBQ8N635 442 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 C11orf65Q8NCR3 313 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 OR5M1Q8NGP8 315 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 OR52P1PQ8NH57 321 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 POC1BQ8TC44 478 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 LRRC58Q96CX6 371 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 UCN2Q96RP3 112 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 SH3GL1Q99961 368 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 TUBA1CQ9BQE3 449 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 SLC39A3Q9BRY0 314 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 THUMPD3Q9BV44 507 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 ARMC7Q9H6L4 198 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 KAT8Q9H7Z6 458 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 CALHM2Q9HA72 323 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 GID8Q9NWU2 228 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 ALKBH4Q9NXW9 302 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 COQ3Q9NZJ6 369 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 CLCF1Q9UBD9 225 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 ANGPT4Q9Y264 503 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 ARL2BPQ9Y2Y0 163 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 IFT52Q9Y366 437 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF337Q9Y3M9 751 aa10.57□□□□□ -0.72
TRAFD1-209ENST00000552896 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 MBD3L4A6NDZ8 208 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 MBD3L3A6NE82 208 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 MBD3L5A6NJ08 208 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 CLCA1A8K7I4 914 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 FAAHO00519 579 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 PGM3O95394 542 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 PABPC4LP0CB38 370 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 COX4I1P13073 169 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 UQCRBP14927 111 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 SLC6A2P23975 617 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 CHRNB4P30926 498 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 TIMP3P35625 211 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 RAC1P63000 192 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 EEF1A1P68104 462 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 SRYQ05066 204 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 PMPCAQ10713 525 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 SELENBP1Q13228 472 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 TOMM34Q15785 309 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 NANOGP8Q6NSW7 305 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 C3orf33Q6P1S2 294 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 SEM1Q6ZVN7 128 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 MAMDC2Q7Z304 686 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 ARPINQ7Z6K5 226 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 PIGWQ7Z7B1 504 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 VRK2Q86Y07 508 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 SLC30A8Q8IWU4 369 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 UBQLNLQ8IYU4 475 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 POU5F2Q8N7G0 328 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 HIPK4Q8NE63 616 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 MBD3L2Q8NHZ7 208 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 FBXO27Q8NI29 283 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 ASB5Q8WWX0 329 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 TMEM234Q8WY98 164 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 CNOT9Q92600 299 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 SLC35B4Q969S0 331 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms