RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 A0A0G2JPF8 293 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 SLC22A20A6NK97 555 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 GJE1A6NN92 205 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 BBIP1A8MTZ0 92 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 HNRNPCL2B2RXH8 293 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 HNRNPCL3B7ZW38 293 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 HNRNPCL1O60812 293 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 NUDT7P0C024 238 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 HNRNPCL4P0DMR1 293 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 NID1P14543 1247 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 PRKCAP17252 672 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 RPS4Y1P22090 263 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 ADSLP30566 484 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 CEACAM8P31997 349 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 RYKP34925 604 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 EIF1AXP47813 144 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 SUCLG1P53597 346 aaKnown RBP16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 TOMM34Q15785 309 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 PRAMEF8Q5VWM4 474 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 PRAMEF7Q5VXH5 474 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 DLEU7Q6UYE1 221 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 SPATA21Q7Z572 469 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 RETREG3Q86VR2 466 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 METTL25Q8N6Q8 603 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 C9orf106Q8NAJ2 232 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 POC1BQ8TC44 478 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 MAL2Q969L2 176 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 DOCK7Q96N67 2140 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 CGREF1Q99674 301 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 CPPED1Q9BRF8 314 aaPredicted RBP16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 ARMC7Q9H6L4 198 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 ZNF232Q9UNY5 417 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 GMEB1Q9Y692 573 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 NKX2-6A6NCS4 301 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 CLDN24A6NM45 220 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 H0YC42 278 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 CCDC22O60826 627 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 TOXO94900 526 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 TMIGD3P0DMS9 266 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 ARAFP10398 606 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 FCGR2AP12318 317 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 BMP5P22003 454 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 PSMA4P25789 261 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 LSP1P33241 339 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 SFTPDP35247 375 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 TPD52P55327 224 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 CLDN15P56746 228 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 GNGT1P63211 74 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 SELENBP1Q13228 472 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 MAPK11Q15759 364 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 CYP51A1Q16850 503 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 TRMT5Q32P41 509 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 RUNDC3AQ59EK9 446 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 MRPL2Q5T653 305 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 ESPNLQ6ZVH7 1005 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 ADGRE4PQ86SQ3 457 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 SNX32Q86XE0 403 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF440Q8IYI8 595 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 LILRA2Q8N149 483 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 NAXEQ8NCW5 288 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 NFKBIDQ8NI38 313 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 CNOT9Q92600 299 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 LRRC46Q96FV0 321 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 KLHL15Q96M94 604 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 ANKRD27Q96NW4 1050 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 UCN2Q96RP3 112 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 NPAS1Q99742 590 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 ELAC2Q9BQ52 826 aaKnown RBP16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 PRRG4Q9BZD6 226 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 UCK2Q9BZX2 261 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 SERINC1Q9NRX5 453 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 PAQR5Q9NXK6 330 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF443Q9Y2A4 671 aaPredicted RBP16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 IFT52Q9Y366 437 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF175Q9Y473 711 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 DSPPQ9NZW4 1301 aa16.64■□□□□ 0.25
PRPF40B-216ENST00000552301 MRASO14807 208 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 SLC22A2O15244 555 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 SYNGR4O95473 234 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 OPN1LWP04000 364 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 THBS1P07996 1170 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 GPX2P18283 190 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 CTSSP25774 331 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 GRNP28799 593 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 SLC7A1P30825 629 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 OPRM1P35372 400 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF136P52737 540 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 SEC24CP53992 1094 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 SESN3P58005 492 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 CDK6Q00534 326 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 MERTKQ12866 999 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 CYLC2Q14093 348 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 PON3Q15166 354 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 ZSWIM7Q19AV6 140 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 COQ5Q5HYK3 327 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 HBMQ6B0K9 141 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 SP5Q6BEB4 398 aaPredicted RBP16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 OR2A2Q6IF42 318 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 ZNF836Q6ZNA1 936 aa16.63■□□□□ 0.25
PRPF40B-216ENST00000552301 CPLX4Q7Z7G2 160 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms