RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 NCCRP1Q6ZVX7 275 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 NR2C2APQ86WQ0 139 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 KLHL36Q8N4N3 616 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 METTL27Q8N6F8 245 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 DTX3Q8N9I9 347 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 SLC37A3Q8NCC5 494 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 NEIL3Q8TAT5 605 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 BRIX1Q8TDN6 353 aaKnown RBP13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 TEX12Q9BXU0 123 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 POT1Q9NUX5 634 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 SIGLEC7Q9Y286 467 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 GSTK1Q9Y2Q3 226 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 VPS13AQ96RL7 3174 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 SPTY2D1-AS1A0A0U1RR47 76 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 TRDV1A0A1B0GX56 115 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 SLC9B1P1A6NJY1 282 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 LRRN3E7EW58 273 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 MAGEB4O15481 346 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 OR10H2O60403 315 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 HMGN1P05114 100 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 BMP7P18075 431 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 PYDC2Q56P42 97 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 NIPAL3Q6P499 406 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 MEPCEQ7L2J0 689 aaKnown RBP13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 VWA5B2Q8N398 1253 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 KISS1RQ969F8 398 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 PEX11GQ96HA9 241 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 TTTY10Q9BZA0 68 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 LRRN3Q9H3W5 708 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 ENTPD2Q9Y5L3 495 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 SPACA6W5XKT8 324 aa13.1□□□□□ -0.31
CALCOCO1-218ENST00000550804 IRGMA1A4Y4 181 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 OR5K3A6NET4 321 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 CTSEP14091 401 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 MAZP56270 477 aaKnown RBP13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 RPS7P62081 194 aaKnown RBP13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 DDI2Q5TDH0 399 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 PRPF38BQ5VTL8 546 aaKnown RBP13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 RPTNQ6XPR3 784 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 GHDCQ8N2G8 530 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 TSTD1Q8NFU3 115 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 OR10H4Q8NGA5 316 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 SPACA7Q96KW9 195 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 STACQ99469 402 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 TEAD3Q99594 435 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 CDX2Q99626 313 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 ORAI3Q9BRQ5 295 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 MED18Q9BUE0 208 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 TPSD1Q9BZJ3 242 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 C11orf54Q9H0W9 315 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 CCDC86Q9H6F5 360 aaKnown RBP13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 ISYNA1Q9NPH2 558 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 MED17Q9NVC6 651 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 SATB2Q9UPW6 733 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 CLCA3PQ9Y6N3 262 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 A0A1B0GWA3 101 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 DYRK3O43781 588 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 CCNKO75909 580 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 HTR3AP46098 478 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 GPR50Q13585 617 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 AGAP6Q5VW22 663 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 Q7L0L9 218 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 GLCCI1Q86VQ1 547 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 LNX2Q8N448 690 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 ACBD7Q8N6N7 88 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 LRRC17Q8N6Y2 441 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 OR51L1Q8NGJ5 315 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 AGAP4Q96P64 663 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 ATF6BQ99941 703 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 ALG8Q9BVK2 526 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 GSDMCQ9BYG8 508 aa13.09□□□□□ -0.31
CALCOCO1-218ENST00000550804 FANCMQ8IYD8 2048 aa13.08□□□□□ -0.31
CALCOCO1-218ENST00000550804 MN1Q10571 1320 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 A0A1B0GVC2 190 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 A6NIN4 97 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 POLR1CO15160 346 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 PLA2G10O15496 165 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 AKAP8O43823 692 aaKnown RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 PTP4A3O75365 173 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 PPP1R3DO95685 299 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 HLA-DPB1P04440 258 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 SLC35E2P0CK97 266 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 DRD5P21918 477 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 PAICSP22234 425 aaKnown RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 RCVRNP35243 200 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 ACAA2P42765 397 aaKnown RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 E2F1Q01094 437 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 KRR1Q13601 381 aaKnown RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 FHL1Q13642 323 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 UBXN2BQ14CS0 331 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 AMZ1Q400G9 498 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 MCATQ8IVS2 390 aaKnown RBP13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 UBQLNLQ8IYU4 475 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 CADM2Q8N3J6 435 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 ARL14Q8N4G2 192 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 ARHGEF39Q8N4T4 335 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 RCBTB1Q8NDN9 531 aa13.08□□□□□ -0.32
CALCOCO1-218ENST00000550804 TOR1AIP2Q8NFQ8 470 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms