RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 NSUN5P2Q63ZY6 315 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 HIST2H2BCQ6DN03 193 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 NANOGP8Q6NSW7 305 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 REEP3Q6NUK4 255 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 PPP4R4Q6NUP7 873 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 ZNF836Q6ZNA1 936 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 TREML1Q86YW5 311 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 CLIP4Q8N3C7 705 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 PCYOX1LQ8NBM8 494 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 FAM71CQ8NEG0 241 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 TNIP2Q8NFZ5 429 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 ZNF563Q8TA94 476 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 BBS10Q8TAM1 723 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 ZPLD1Q8TCW7 415 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 CA5BP1Q8WTZ4 195 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 OIT3Q8WWZ8 545 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 PMM1Q92871 262 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 CCDC106Q9BWC9 280 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 NANOGQ9H9S0 305 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
TROAP-213ENST00000550709 STOML1Q9UBI4 398 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 PLEKHB1Q9UF11 243 aaPredicted RBP12.39□□□□□ -0.43
TROAP-213ENST00000550709 Q9UFV3 132 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 ZNF232Q9UNY5 417 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 ZNF443Q9Y2A4 671 aaPredicted RBP12.39□□□□□ -0.43
TROAP-213ENST00000550709 GPC6Q9Y625 555 aaPredicted RBP12.39□□□□□ -0.43
TROAP-213ENST00000550709 GMEB1Q9Y692 573 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 AP4B1Q9Y6B7 739 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 USP9YO00507 2555 aaPredicted RBP12.39□□□□□ -0.43
TROAP-213ENST00000550709 SPTBN1Q01082 2364 aaKnown RBP12.38□□□□□ -0.43
TROAP-213ENST00000550709 DSPPQ9NZW4 1301 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 PCNX1Q96RV3 2341 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 C7orf72A4D263 438 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 FAM90A27PA6NNH2 459 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 FXYD1O00168 92 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 EIF1AYO14602 144 aaKnown RBP12.38□□□□□ -0.43
TROAP-213ENST00000550709 AP3D1O14617 1153 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 AIM2O14862 343 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 EFNA2O43921 213 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 ADAM11O75078 769 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 TOXO94900 526 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 GKN3PP0CG01 181 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 PSMA4P25789 261 aaKnown RBP12.38□□□□□ -0.43
TROAP-213ENST00000550709 COL8A1P27658 744 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 SHC1P29353 583 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 EIF1AXP47813 144 aaKnown RBP12.38□□□□□ -0.43
TROAP-213ENST00000550709 COQ5Q5HYK3 327 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 ZNF311Q5JNZ3 666 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 PRAMEF8Q5VWM4 474 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 PRAMEF7Q5VXH5 474 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 MAMDC2Q7Z304 686 aaPredicted RBP12.38□□□□□ -0.43
TROAP-213ENST00000550709 LSRQ86X29 649 aaPredicted RBP12.38□□□□□ -0.43
TROAP-213ENST00000550709 GRAMD2AQ8IUY3 354 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 LACC1Q8IV20 430 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 CMIPQ8IY22 773 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 LILRA2Q8N149 483 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 C9orf106Q8NAJ2 232 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 OR10A6Q8NH74 314 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 RP9Q8TA86 221 aaKnown RBP12.38□□□□□ -0.43
TROAP-213ENST00000550709 ZNF845Q96IR2 970 aaPredicted RBP12.38□□□□□ -0.43
TROAP-213ENST00000550709 PINK1Q9BXM7 581 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 UCK2Q9BZX2 261 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 TMEM38AQ9H6F2 299 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 KAT8Q9H7Z6 458 aaKnown RBP12.38□□□□□ -0.43
TROAP-213ENST00000550709 CALHM2Q9HA72 323 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 BCL2L10Q9HD36 194 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 GID8Q9NWU2 228 aa12.38□□□□□ -0.43
TROAP-213ENST00000550709 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 CFAP73A6NFT4 308 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 CD8B2A6NJW9 211 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 PRSS44E7EML9 344 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 TNFSF11O14788 317 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 CLDN14O95500 239 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 IL2RAP01589 272 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 GP1BBP13224 206 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 AGAP20933 346 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 HTR1EP28566 365 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 CHRNB4P30926 498 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 SLC6A8P48029 635 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 IDH2P48735 452 aaKnown RBP12.37□□□□□ -0.43
TROAP-213ENST00000550709 AGFG1P52594 562 aaKnown RBP12.37□□□□□ -0.43
TROAP-213ENST00000550709 EEFSECP57772 596 aaKnown RBP12.37□□□□□ -0.43
TROAP-213ENST00000550709 RAC1P63000 192 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 EEF1A1P68104 462 aaKnown RBP12.37□□□□□ -0.43
TROAP-213ENST00000550709 MERTKQ12866 999 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 SGCBQ16585 318 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 TMEM176BQ3YBM2 270 aaPredicted RBP12.37□□□□□ -0.43
TROAP-213ENST00000550709 RIPPLY2Q5TAB7 128 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 P4HA3Q7Z4N8 544 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 PIGWQ7Z7B1 504 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 GGNQ86UU5 652 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 KRT73Q86Y46 540 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 PTOV1Q86YD1 416 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 METTL25Q8N6Q8 603 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 C11orf65Q8NCR3 313 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 NAXEQ8NCW5 288 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 HIPK4Q8NE63 616 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 ASB5Q8WWX0 329 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 FIG4Q92562 907 aa12.37□□□□□ -0.43
TROAP-213ENST00000550709 MRGPRX4Q96LA9 322 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms