RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SAMD11Q96NU1 681 aa14.83□□□□□ -0.03
RBFOX1-212ENST00000550418 IL21RQ9HBE5 538 aa14.83□□□□□ -0.03
RBFOX1-212ENST00000550418 GGT3PA6NGU5 568 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 KIAA0355O15063 1070 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 GPRIN2O60269 458 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 SRPX2O60687 465 aaPredicted RBP14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 ARHGAP40Q5TG30 622 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 FAM122BQ7Z309 247 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 C12orf40Q86WS4 652 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 OR4M1Q8NGD0 313 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 KLHL15Q96M94 604 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 PELI2Q9HAT8 420 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 CSNK1G1Q9HCP0 422 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 C1GALT1Q9NS00 363 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 MED17Q9NVC6 651 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 CXXC1Q9P0U4 656 aaPredicted RBP14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 MYEF2Q9P2K5 600 aaKnown RBP14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 LSM5Q9Y4Y9 91 aaKnown RBP14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 URB1O60287 2271 aaKnown RBP14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 SMCO3A2RU48 225 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 M0QZQ0 153 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 ARNTP27540 789 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 HSD11B2P80365 405 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 CNKSR3Q6P9H4 555 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 MS4A4EQ96PG1 132 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 ATP13A2Q9NQ11 1180 aa14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 TNRC6CQ9HCJ0 1690 aaKnown RBP14.83□□□□□ -0.04
RBFOX1-212ENST00000550418 E9PI62 339 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 KNG1P01042 644 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 GALTP07902 379 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 HOXD11P31277 338 aaPredicted RBP14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 GATMP50440 423 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 RAB5CP51148 216 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 HENMT1Q5T8I9 393 aaKnown RBP14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 PAQR9Q6ZVX9 377 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 DNAJA3Q96EY1 480 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 RADILQ96JH8 1075 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 ADAMTS7Q9UKP4 1686 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 TRABD2BA6NFA1 517 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 TRIM64A6NGJ6 449 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 TRIM64BA6NI03 449 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 FAM227AF5H4B4 570 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 GPR176Q14439 515 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 STK11Q15831 433 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 GPR157Q5UAW9 335 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 SBSNQ6UWP8 590 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 BCDIN3DQ7Z5W3 292 aaKnown RBP14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 RIMKLAQ8IXN7 391 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 SSX3Q99909 188 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 CAMK2AQ9UQM7 478 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 RPS10-NUDT3A0A1W2PQS6 291 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 P2RX6O15547 441 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 GJB3O75712 270 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 RPS10P46783 165 aaKnown RBP14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 SNRPGP62308 76 aaKnown RBP14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 SAXO2Q658L1 398 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 ERN2Q76MJ5 926 aaKnown RBP14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 ZNF440Q8IYI8 595 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 DDOQ99489 341 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 DNTTIP1Q9H147 329 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 MYO7AQ13402 2215 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 ETV6P41212 452 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 PRPS1P60891 318 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 LTBQ06643 244 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 NLRP8Q86W28 1048 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 NANOGP1Q8N7R0 232 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 ZNF680Q8NEM1 530 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 SLC38A5Q8WUX1 472 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 CDCA4Q9BXL8 241 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 PRTFDC1Q9NRG1 225 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 ASB6Q9NWX5 421 aa14.82□□□□□ -0.04
RBFOX1-212ENST00000550418 AKR7A2O43488 359 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 SIX6O95475 246 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 IL1RNP18510 177 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 RAB28P51157 221 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 SLC6A19Q695T7 634 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 KANSL1Q7Z3B3 1105 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 NRSN1Q8IZ57 195 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 TTC9BQ8N6N2 239 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 DCLRE1CQ96SD1 692 aaKnown RBP14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 FBXL12Q9NXK8 326 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 HRH3Q9Y5N1 445 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 LRP5O75197 1615 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 SSX4O60224 188 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 ZNF16P17020 682 aaPredicted RBP14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 SLC26A5P58743 744 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 CSNK2A1P68400 391 aaPredicted RBP14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 C2orf27AQ580R0 203 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 PRRT3Q5FWE3 981 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 RPL22L1Q6P5R6 122 aaKnown RBP14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 CSNK2A3Q8NEV1 391 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 IL17RDQ8NFM7 739 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 OR5M3Q8NGP4 307 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 LGALS14Q8TCE9 139 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 SFXN5Q8TD22 340 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 GHSRQ92847 366 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 MVB12BQ9H7P6 319 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 TMEM82A0PJX8 343 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 SCO1O75880 301 aa14.81□□□□□ -0.04
RBFOX1-212ENST00000550418 ZNF865P0CJ78 1059 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms