RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 H7C1C5 153 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 KHNYNO15037 678 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 RFPL3O75679 317 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 TOXO94900 526 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 IL1AP01583 271 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 ELK1P19419 428 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 DRD5P21918 477 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 GABRA5P31644 462 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 FRKP42685 505 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 SOX2P48431 317 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 LCN6P62502 163 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 DUSP6Q16828 381 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 MRM1Q6IN84 353 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 MBOAT2Q6ZWT7 520 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 ABHD13Q7L211 337 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 MRGPRX1Q96LB2 322 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 BMFQ96LC9 184 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 HS6ST2Q96MM7 605 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 TSSK2Q96PF2 358 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 NXF2Q9GZY0 626 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 RNF121Q9H920 327 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 FAM60AQ9NP50 221 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 MCUBQ9NWR8 336 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 KCNE5Q9UJ90 142 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 A0A075B6Q4 140 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 ARRDC5A6NEK1 342 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 B4DXG7 233 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 SNRPBP14678 240 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 MAOAP21397 527 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 FOXL2P58012 376 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 POU6F2P78424 691 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 BTG2P78543 158 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 IFITM2Q01629 132 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 MRPL28Q13084 256 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 BCL2L15Q5TBC7 163 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 ZNF322Q6U7Q0 402 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 PRSS45Q7RTY3 260 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 PAQR7Q86WK9 346 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 CAMKVQ8NCB2 501 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 LMF1Q96S06 567 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 BRD7Q9NPI1 651 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 KRCC1Q9NPI7 259 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 ENAMQ9NRM1 1142 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 TEKT2Q9UIF3 430 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 SLCO1B1Q9Y6L6 691 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 SDK2Q58EX2 2172 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 IDSB3KWA1 339 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 HCN1O60741 890 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 ZGLP1P0C6A0 271 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 IGFBP4P22692 258 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 KIR2DL1P43626 348 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 EMDP50402 254 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 MAZP56270 477 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 TRA2BP62995 288 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 ALG11Q2TAA5 492 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 FAAH2Q6GMR7 532 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 TMEM92Q6UXU6 159 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 SLC44A3Q8N4M1 653 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 UXS1Q8NBZ7 420 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 OR5W2Q8NH69 310 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 SLC37A2Q8TED4 501 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 CHAC2Q8WUX2 184 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 GIMAP5Q96F15 307 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 OR2A5Q96R48 311 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 COQ7Q99807 217 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 ABCG5Q9H222 651 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 CPNE7Q9UBL6 633 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 HSPB11Q9Y547 144 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 IER3IP1Q9Y5U9 82 aa12.67□□□□□ -0.38
PRPF40B-209ENST00000548825 ZNF106Q9H2Y7 1883 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 GTPBP1O00178 669 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 PLA2G10O15496 165 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 LYRM1O43325 122 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 HMGN1P05114 100 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 ST6GAL1P15907 406 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 CTHP32929 405 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 TPMTP51580 245 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 FOXK2Q01167 660 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 BNC1Q01954 994 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 SLC25A35Q3KQZ1 300 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 TMEM201Q5SNT2 666 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 PRAMEF17Q5VTA0 474 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 LINC00299Q6ZSB3 139 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 ORAI3Q9BRQ5 295 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 LYARQ9NX58 379 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 PHF11Q9UIL8 331 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 SLC9B1P1A6NJY1 282 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 AKR7A2O43488 359 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 CHST10O43529 356 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 LANCL1O43813 399 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 DOK2O60496 412 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 PTHLHP12272 177 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 ZNF10P21506 573 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 XKRXQ6PP77 449 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 QSOX2Q6ZRP7 698 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 YIPF7Q8N8F6 280 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 OR5J2Q8NH18 312 aa12.66□□□□□ -0.38
PRPF40B-209ENST00000548825 FAM174AQ8TBP5 190 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms