RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PCED1AQ9H1Q7 454 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 TRIM45Q9H8W5 580 aaPredicted RBP10.99□□□□□ -0.65
CCDC38-202ENST00000546386 PRDM9Q9NQV7 894 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 ANKRD10Q9NXR5 420 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 RALGAPA1Q6GYQ0 2036 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 FITM1A5D6W6 292 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 TMEM221A6NGB7 291 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 M0R296 226 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 DVL2O14641 736 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 GRPRP30550 384 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 IFNA8P32881 189 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 FBXW4P57775 412 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 SMIM11AP58511 58 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 SKP1P63208 163 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 DHRS4L2Q6PKH6 230 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 MBOAT2Q6ZWT7 520 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 KANSL1Q7Z3B3 1105 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.98□□□□□ -0.65
CCDC38-202ENST00000546386 OAFQ86UD1 273 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 P2RY8Q86VZ1 359 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 OR51G2Q8NGK0 314 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 PLEKHA8Q96JA3 519 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 UCK1Q9HA47 277 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 CORINQ9Y5Q5 1042 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 G3V3Y1 287 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 H7C1C5 153 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 SYT5O00445 386 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 ARHGAP33O14559 1287 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 UTS2O95399 124 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 AGR2O95994 175 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 F13BP05160 661 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 CLK1P49759 484 aaKnown RBP10.98□□□□□ -0.65
CCDC38-202ENST00000546386 EPHA4P54764 986 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 LCN6P62502 163 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 TOP3AQ13472 1001 aaPredicted RBP10.98□□□□□ -0.65
CCDC38-202ENST00000546386 ZNF791Q3KP31 576 aaPredicted RBP10.98□□□□□ -0.65
CCDC38-202ENST00000546386 SLX4IPQ5VYV7 408 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 WDR74Q6RFH5 385 aaPredicted RBP10.98□□□□□ -0.65
CCDC38-202ENST00000546386 PLEKHG7Q6ZR37 379 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 ERI1Q8IV48 349 aaKnown RBP10.98□□□□□ -0.65
CCDC38-202ENST00000546386 OR5M1Q8NGP8 315 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 OR4K13Q8NH42 304 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 FANK1Q8TC84 345 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 POP5Q969H6 163 aaKnown RBP10.98□□□□□ -0.65
CCDC38-202ENST00000546386 TSSK2Q96PF2 358 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 GFM1Q96RP9 751 aaKnown RBP10.98□□□□□ -0.65
CCDC38-202ENST00000546386 UBQLN3Q9H347 655 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 ZNF768Q9H5H4 540 aaKnown RBP10.98□□□□□ -0.65
CCDC38-202ENST00000546386 TMEM27Q9HBJ8 222 aa10.98□□□□□ -0.65
CCDC38-202ENST00000546386 EML6Q6ZMW3 1958 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 E9PQ18 207 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 MAGEB3O15480 346 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 OXSR1O95747 527 aaPredicted RBP10.97□□□□□ -0.65
CCDC38-202ENST00000546386 BCL10O95999 233 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 HEXBP07686 556 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 HOXB6P17509 224 aaKnown RBP10.97□□□□□ -0.65
CCDC38-202ENST00000546386 MST1P26927 711 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 ABCD3P28288 659 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 RPS27P42677 84 aaKnown RBP10.97□□□□□ -0.65
CCDC38-202ENST00000546386 GABARAPL2P60520 117 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 CDK5Q00535 292 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 TSPAN31Q12999 210 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 SNTA1Q13424 505 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 GARNL3Q5VVW2 1013 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 HLA-DQA1Q5Y7H0 255 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 SDR9C7Q8NEX9 313 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 ANKK1Q8NFD2 765 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 ZNF563Q8TA94 476 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 ZPLD1Q8TCW7 415 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 ZNF566Q969W8 418 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 HSPBAP1Q96EW2 488 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 RNFT2Q96EX2 444 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 TRMT61AQ96FX7 289 aaKnown RBP10.97□□□□□ -0.65
CCDC38-202ENST00000546386 TM9SF2Q99805 663 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 ERVMER34-1Q9H9K5 563 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 HINT3Q9NQE9 182 aaKnown RBP10.97□□□□□ -0.65
CCDC38-202ENST00000546386 RPS6KB2Q9UBS0 482 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 MN1Q10571 1320 aaPredicted RBP10.97□□□□□ -0.65
CCDC38-202ENST00000546386 LNP1A1A4G5 178 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 SERINC4A6NH21 518 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 HBQ1P09105 142 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 DRD5P21918 477 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 TGFBR2P37173 567 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 SMSP52788 366 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 ATP12AP54707 1039 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 DECR1Q16698 335 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 C12orf73Q69YU5 71 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 PLAG1Q6DJT9 500 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 BORAQ6PGQ7 559 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 ZNF620Q6ZNG0 422 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 SLCO6A1Q86UG4 719 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 RFLNBQ8N5W9 214 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 POGLUT1Q8NBL1 392 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 OR8J1Q8NGP2 316 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 CEP76Q8TAP6 659 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 GNPDA2Q8TDQ7 276 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 DUSP19Q8WTR2 217 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 MYDGFQ969H8 173 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 SLC25A36Q96CQ1 311 aa10.97□□□□□ -0.65
CCDC38-202ENST00000546386 LGALS12Q96DT0 336 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms