RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PYROXD2Q8N2H3 581 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 ZBTB44Q8NCP5 570 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 OR10H4Q8NGA5 316 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 OR52J3Q8NH60 311 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 C11orf24Q96F05 449 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-224ENST00000545688 CRNKL1Q9BZJ0 848 aaKnown RBP2.8□□□□□ -1.96
SNHG1-224ENST00000545688 CCSER1Q9C0I3 900 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 CARD9Q9H257 536 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 POMKQ9H5K3 350 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 ALG9Q9H6U8 611 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 MAGEF1Q9HAY2 307 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 CYTL1Q9NRR1 136 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 DUSP12Q9UNI6 340 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 LAMA1P25391 3075 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 SPTA1P02549 2419 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 LCTP09848 1927 aa2.8□□□□□ -1.96
SNHG1-224ENST00000545688 MYO5AQ9Y4I1 1855 aaKnown RBP2.79□□□□□ -1.96
SNHG1-224ENST00000545688 PLIN4Q96Q06 1357 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 RAD50Q92878 1312 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 ZNF532Q9HCE3 1301 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 A4D1N5 150 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 CHRNA1P02708 482 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 PTBP1P26599 531 aaKnown RBP eCLIP2.79□□□□□ -1.963e-55■■□□□ 13.5
SNHG1-224ENST00000545688 PPOXP50336 477 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 SERPINH1P50454 418 aaKnown RBP2.79□□□□□ -1.96
SNHG1-224ENST00000545688 ASIC1P78348 528 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 PUDPQ08623 228 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 MGAT3Q09327 533 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 IL18R1Q13478 541 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 PRAMEF8Q5VWM4 474 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 UFSP1Q6NVU6 142 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 TRPM8Q7Z2W7 1104 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 TSEN54Q7Z6J9 526 aaKnown RBP2.79□□□□□ -1.96
SNHG1-224ENST00000545688 OR4F17Q8NGA8 305 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 STARD4Q96DR4 205 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 DNAJA3Q96EY1 480 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 ACCSQ96QU6 501 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 OR4F4Q96R69 305 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 TBX15Q96SF7 602 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 APOOQ9BUR5 198 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 NANOGQ9H9S0 305 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 EXOSC3Q9NQT5 275 aaKnown RBP2.79□□□□□ -1.96
SNHG1-224ENST00000545688 PNPLA3Q9NST1 481 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 VPS54Q9P1Q0 977 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 LEF1Q9UJU2 399 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-224ENST00000545688 RALGAPA2Q2PPJ7 1873 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 PTPN13Q12923 2485 aa2.79□□□□□ -1.96
SNHG1-224ENST00000545688 IGLV3-16A0A075B6K0 115 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 N4BP1O75113 896 aaKnown RBP2.78□□□□□ -1.96
SNHG1-224ENST00000545688 ECDO95905 644 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-224ENST00000545688 TDGF1P13385 188 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 RPS6P62753 249 aaKnown RBP2.78□□□□□ -1.96
SNHG1-224ENST00000545688 BTG3Q14201 252 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-224ENST00000545688 FAM43BQ6ZT52 329 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-224ENST00000545688 SLC22A16Q86VW1 577 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 BBS1Q8NFJ9 593 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 PPTC7Q8NI37 304 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 RAB39BQ96DA2 213 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 ZMAT2Q96NC0 199 aaKnown RBP2.78□□□□□ -1.96
SNHG1-224ENST00000545688 CWH43Q9H720 699 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 PATZ1Q9HBE1 687 aaKnown RBP2.78□□□□□ -1.96
SNHG1-224ENST00000545688 ANGPTL2Q9UKU9 493 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 KLHDC2Q9Y2U9 406 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 IGSF10Q6WRI0 2623 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 MYO18BQ8IUG5 2567 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 USP9XQ93008 2570 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-224ENST00000545688 ZNF462Q96JM2 2506 aa2.78□□□□□ -1.96
SNHG1-224ENST00000545688 ITPR1Q14643 2758 aa2.78□□□□□ -1.97
SNHG1-224ENST00000545688 NAV1Q8NEY1 1877 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 F5P12259 2224 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 KALRNO60229 2985 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 WDR19Q8NEZ3 1342 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 A0A0J9YVX5 310 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 MBLAC1A4D2B0 266 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-224ENST00000545688 HIDE1A8MVS5 230 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 PDLIM1O00151 329 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 KINO60870 393 aaKnown RBP2.77□□□□□ -1.97
SNHG1-224ENST00000545688 LRP3O75074 770 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 GPX5O75715 221 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 HPNP05981 417 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 SFTPBP07988 381 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 VCLP18206 1134 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 FCARP24071 287 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 SNU13P55769 128 aaKnown RBP2.77□□□□□ -1.97
SNHG1-224ENST00000545688 RAG2P55895 527 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 STARD6P59095 220 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 SNAP25P60880 206 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 ZNF45Q02386 682 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 BCL2L1Q07817 233 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 NPRL3Q12980 569 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 TYSND1Q2T9J0 566 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 HSDL1Q3SXM5 330 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 GPAT3Q53EU6 434 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 N4BP2L1Q5TBK1 243 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-224ENST00000545688 MEDAGQ5VYS4 303 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 SYCP3Q8IZU3 236 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 MRPL43Q8N983 215 aaKnown RBP2.77□□□□□ -1.97
SNHG1-224ENST00000545688 OR4A16Q8NH70 328 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 SPATA17Q96L03 361 aa2.77□□□□□ -1.97
SNHG1-224ENST00000545688 CTRCQ99895 268 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms