RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SLC25A53Q5H9E4 307 aa18.84■□□□□ 0.61
SCARB1-210ENST00000545493 SPANXN4Q5MJ08 99 aa18.84■□□□□ 0.61
SCARB1-210ENST00000545493 HEPHL1Q6MZM0 1159 aa18.84■□□□□ 0.61
SCARB1-210ENST00000545493 LRRC34Q8IZ02 419 aa18.84■□□□□ 0.61
SCARB1-210ENST00000545493 OR5W2Q8NH69 310 aa18.84■□□□□ 0.61
SCARB1-210ENST00000545493 MIPOL1Q8TD10 442 aa18.84■□□□□ 0.61
SCARB1-210ENST00000545493 MRGPRX4Q96LA9 322 aa18.84■□□□□ 0.61
SCARB1-210ENST00000545493 UBTD1Q9HAC8 227 aa18.84■□□□□ 0.61
SCARB1-210ENST00000545493 MEAF6Q9HAF1 191 aa18.84■□□□□ 0.61
SCARB1-210ENST00000545493 MKLN1Q9UL63 735 aa18.84■□□□□ 0.61
SCARB1-210ENST00000545493 DUXAA6NLW8 204 aa18.83■□□□□ 0.6
SCARB1-210ENST00000545493 KIAA0513O60268 411 aa18.83■□□□□ 0.6
SCARB1-210ENST00000545493 EIF4E2O60573 245 aaKnown RBP18.83■□□□□ 0.6
SCARB1-210ENST00000545493 C1QCP02747 245 aa18.83■□□□□ 0.6
SCARB1-210ENST00000545493 CARD18P57730 90 aa18.83■□□□□ 0.6
SCARB1-210ENST00000545493 CBFBQ13951 182 aa18.83■□□□□ 0.6
SCARB1-210ENST00000545493 SAXO2Q658L1 398 aa18.83■□□□□ 0.6
SCARB1-210ENST00000545493 TNFAIP8L2Q6P589 184 aaPredicted RBP18.83■□□□□ 0.6
SCARB1-210ENST00000545493 TOR1AIP2Q8NFQ8 470 aa18.83■□□□□ 0.6
SCARB1-210ENST00000545493 KCNK9Q9NPC2 374 aa18.83■□□□□ 0.6
SCARB1-210ENST00000545493 KLHL13Q9P2N7 655 aa18.83■□□□□ 0.6
SCARB1-210ENST00000545493 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.82■□□□□ 0.6
SCARB1-210ENST00000545493 GJE1A6NN92 205 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 SDHDO14521 159 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 DNAJA2O60884 412 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 BCAS1O75363 584 aaPredicted RBP18.82■□□□□ 0.6
SCARB1-210ENST00000545493 STX11O75558 287 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 H6PDO95479 791 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 CPSF4O95639 269 aaKnown RBP18.82■□□□□ 0.6
SCARB1-210ENST00000545493 OR12D1P0DN82 309 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 LBPP18428 481 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 PLAURQ03405 335 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 STX3Q13277 289 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 CASP8Q14790 479 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 MAPK14Q16539 360 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 TMEM176BQ3YBM2 270 aaPredicted RBP18.82■□□□□ 0.6
SCARB1-210ENST00000545493 TYW3Q6IPR3 259 aaKnown RBP18.82■□□□□ 0.6
SCARB1-210ENST00000545493 OGFOD2Q6N063 350 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 TFAP2EQ6VUC0 442 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 FCRLAQ7L513 359 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 C16orf62Q7Z3J2 963 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 NUFIP2Q7Z417 695 aaKnown RBP18.82■□□□□ 0.6
SCARB1-210ENST00000545493 KIRREL3Q8IZU9 778 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 ANKRD42Q8N9B4 389 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 FAM71CQ8NEG0 241 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 ATP6V1C2Q8NEY4 427 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 TEX37Q96LM6 180 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 ACTR6Q9GZN1 396 aa18.82■□□□□ 0.6
SCARB1-210ENST00000545493 GSX1Q9H4S2 264 aaPredicted RBP18.82■□□□□ 0.6
SCARB1-210ENST00000545493 IGHV3-15A0A0B4J1V0 119 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 PRSS51A0A1B0GVH4 220 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 A0A1W2PNR3 127 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 PRAMEF27A3QJZ7 478 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 E9PBE3 544 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 PPP3CBP16298 524 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 UQCRC2P22695 453 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 CLNS1AP54105 237 aaKnown RBP18.81■□□□□ 0.6
SCARB1-210ENST00000545493 WDR4P57081 412 aaKnown RBP18.81■□□□□ 0.6
SCARB1-210ENST00000545493 RNPS1Q15287 305 aaKnown RBP18.81■□□□□ 0.6
SCARB1-210ENST00000545493 ACKR1Q16570 336 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 DPY19L1Q2PZI1 675 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 FAM174BQ3ZCQ3 159 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 ANXA8L1Q5VT79 327 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 C3orf33Q6P1S2 294 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 FRRS1Q6ZNA5 592 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 BEND4Q6ZU67 534 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 TUSC5Q8IXB3 177 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 RAB8BQ92930 207 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 NEURL3Q96EH8 262 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 PIP5K1AQ99755 562 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 LAT2Q9GZY6 243 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 QRSL1Q9H0R6 528 aaKnown RBP18.81■□□□□ 0.6
SCARB1-210ENST00000545493 AIG1Q9NVV5 245 aa18.81■□□□□ 0.6
SCARB1-210ENST00000545493 ING1Q9UK53 422 aaPredicted RBP18.81■□□□□ 0.6
SCARB1-210ENST00000545493 ANK3Q12955 4377 aaKnown RBP18.8■□□□□ 0.6
SCARB1-210ENST00000545493 C9JVG2 144 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 KLF4O43474 513 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 GCM2O75603 506 aaPredicted RBP18.8■□□□□ 0.6
SCARB1-210ENST00000545493 PABPC4LP0CB38 370 aaKnown RBP18.8■□□□□ 0.6
SCARB1-210ENST00000545493 UBTFL6P0CB48 400 aaPredicted RBP18.8■□□□□ 0.6
SCARB1-210ENST00000545493 PSMB1P20618 241 aaKnown RBP18.8■□□□□ 0.6
SCARB1-210ENST00000545493 ENPP1P22413 925 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 KHKP50053 298 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 NME5P56597 212 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 TIGD2Q4W5G0 525 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 STK32CQ86UX6 486 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 GABRG1Q8N1C3 465 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 CCDC115Q96NT0 180 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 CCL19Q99731 98 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 PAIP2Q9BPZ3 127 aaKnown RBP18.8■□□□□ 0.6
SCARB1-210ENST00000545493 PSD2Q9BQI7 771 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 THUMPD3Q9BV44 507 aaKnown RBP18.8■□□□□ 0.6
SCARB1-210ENST00000545493 TIGARQ9NQ88 270 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 EXD2Q9NVH0 621 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 PCDHGB4Q9UN71 923 aa18.8■□□□□ 0.6
SCARB1-210ENST00000545493 NIPBLQ6KC79 2804 aaeCLIP18.79■□□□□ 0.6
SCARB1-210ENST00000545493 SNNO75324 88 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-210ENST00000545493 CYP7B1O75881 506 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 CSTAP01040 98 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 GUSBP08236 651 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms