RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 MYBPC1Q00872 1141 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 PFKFB4Q16877 469 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 FAM83EQ2M2I3 478 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 SLC9B1Q4ZJI4 515 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 SLC25A53Q5H9E4 307 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 REP15Q6BDI9 236 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 FAM180BQ6P0A1 224 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 GOLGA7Q7Z5G4 137 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 MTDHQ86UE4 582 aaKnown RBP6.33□□□□□ -1.4
COPA-207ENST00000545284 CTAGE4Q8IX94 777 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 FAM169BQ8N8A8 192 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 NUP37Q8NFH4 326 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 OR4M2Q8NGB6 313 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 OR6Y1Q8NGX8 325 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 OR4C3Q8NH37 302 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 EXT2Q93063 718 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 ARL5BQ96KC2 179 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 ANKRD27Q96NW4 1050 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 DOK1Q99704 481 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 NPAS1Q99742 590 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 GPA33Q99795 319 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 PKP2Q99959 881 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 IQCGQ9H095 443 aaKnown RBP6.33□□□□□ -1.4
COPA-207ENST00000545284 ZNF442Q9H7R0 627 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 ACSS1Q9NUB1 689 aaPredicted RBP6.33□□□□□ -1.4
COPA-207ENST00000545284 DDX18Q9NVP1 670 aaKnown RBP6.33□□□□□ -1.4
COPA-207ENST00000545284 PARPBPQ9NWS1 579 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 VPS29Q9UBQ0 182 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 SLC12A4Q9UP95 1085 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 CHMP2BQ9UQN3 213 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 NOSIPQ9Y314 301 aaKnown RBP6.33□□□□□ -1.4
COPA-207ENST00000545284 TRAF6Q9Y4K3 522 aa6.33□□□□□ -1.4
COPA-207ENST00000545284 WNK1Q9H4A3 2382 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 GOLGA6L10A0A0M3HER8 536 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 C3orf80F5H4A9 247 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 M0QZ24 198 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 SCDO00767 359 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 DNPH1O43598 174 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 GMFGO60234 142 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 MRPL33O75394 65 aaKnown RBP6.32□□□□□ -1.4
COPA-207ENST00000545284 NME6O75414 186 aaPredicted RBP6.32□□□□□ -1.4
COPA-207ENST00000545284 RGS9O75916 674 aaPredicted RBP6.32□□□□□ -1.4
COPA-207ENST00000545284 NKX2-2O95096 273 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 ESRRBO95718 433 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 ITGA5P08648 1049 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 ACHEP22303 614 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 EDNRAP25101 427 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 ZFP36P26651 326 aaKnown RBP6.32□□□□□ -1.4
COPA-207ENST00000545284 MPGP29372 298 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 GABRA3P34903 492 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 SPRP35270 261 aaPredicted RBP6.32□□□□□ -1.4
COPA-207ENST00000545284 MAP3K8P41279 467 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 RFX3P48380 749 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 SERPINB4P48594 390 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 EVX1P49640 407 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 P2RX1P51575 399 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 SLC16A1P53985 500 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 ARL4CP56559 192 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 CCNIQ14094 377 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 PPP1R7Q15435 360 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 TRIP10Q15642 601 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 KCTD19Q17RG1 926 aaPredicted RBP6.32□□□□□ -1.4
COPA-207ENST00000545284 SAXO2Q658L1 398 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 ABLIM2Q6H8Q1 611 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 ACSM5Q6NUN0 579 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 C3orf33Q6P1S2 294 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 ZCCHC12Q6PEW1 402 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 KLHL24Q6TFL4 600 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 ZNF662Q6ZS27 426 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 C1orf229Q6ZS94 237 aaPredicted RBP6.32□□□□□ -1.4
COPA-207ENST00000545284 TMPPEQ6ZT21 453 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 SPATA19Q7Z5L4 167 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 TMEM139Q8IV31 216 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 CLDND2Q8NHS1 167 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 FBXO27Q8NI29 283 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 EXOSC8Q96B26 276 aaKnown RBP6.32□□□□□ -1.4
COPA-207ENST00000545284 PBKQ96KB5 322 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 ZNF300Q96RE9 604 aaPredicted RBP6.32□□□□□ -1.4
COPA-207ENST00000545284 RBBP8Q99708 897 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 SLC6A7Q99884 636 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 HOXD1Q9GZZ0 328 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 MS4A5Q9H3V2 200 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 NOL11Q9H8H0 719 aaKnown RBP6.32□□□□□ -1.4
COPA-207ENST00000545284 CAB39LQ9H9S4 337 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 G6PC2Q9NQR9 355 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 TMCO1Q9UM00 188 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 SNX6Q9UNH7 406 aa6.32□□□□□ -1.4
COPA-207ENST00000545284 LOC105371242A0A075B767 164 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 A0A1W2PR80 420 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 CXorf49A8MYA2 514 aaPredicted RBP6.31□□□□□ -1.4
COPA-207ENST00000545284 C9JVG2 144 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 H3BNH8 94 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 OR7A17O14581 309 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 TIMM23O14925 209 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 SLU7O95391 586 aaKnown RBP6.31□□□□□ -1.4
COPA-207ENST00000545284 IGKV1D-16P01601 117 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 RNASE1P07998 156 aaKnown RBP6.31□□□□□ -1.4
COPA-207ENST00000545284 IL3P08700 152 aa6.31□□□□□ -1.4
COPA-207ENST00000545284 SAGP10523 405 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms