RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 ARHGDIGQ99819 225 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 KCTD3Q9Y597 815 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 A0A1W2PQ45 241 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 A0A1W2PQY0 241 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SOCS6O14544 535 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 GATCO43716 136 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TRAF3IP2O43734 574 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 EPHX1P07099 455 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SLC10A3P09131 477 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 AHRP35869 848 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 HNF4GQ14541 408 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 IRF4Q15306 451 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 HAGHQ16775 308 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 PAGE3Q5JUK9 113 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 PSRC1Q6PGN9 363 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TEX261Q6UWH6 196 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TMEM107Q6UX40 140 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 MEX3DQ86XN8 651 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 ZNF610Q8N9Z0 462 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 OR51L1Q8NGJ5 315 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 ZNF587Q96SQ5 575 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 USB1Q9BQ65 265 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TIMM29Q9BSF4 260 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TPPP3Q9BW30 176 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 ELOVL1Q9BW60 279 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 UBIAD1Q9Y5Z9 338 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 U3KQ87 197 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 ZNF320A2RRD8 509 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 KIAA1324LA8MWY0 1029 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 G3V3Q6 166 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 GRIN3BO60391 1043 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 NXPH3O95157 252 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 NSA2O95478 260 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 POP4O95707 220 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 THBS2P35442 1172 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 PGGT1BP53609 377 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 MAT1AQ00266 395 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 ADPRMQ3LIE5 342 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 LBHQ53QV2 105 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 AMZ2Q86W34 360 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 NRMQ8IXM6 262 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 CLECL1Q8IZS7 167 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 ARNTL2Q8WYA1 636 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 RPL10LQ96L21 214 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 PRMT6Q96LA8 375 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 PITX2Q99697 317 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 NICN1Q9BSH3 213 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 CNIH4Q9P003 139 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 NEXMIFQ5QGS0 1516 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 DISP1Q96F81 1524 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 CLTCL1P53675 1640 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SLIT1O75093 1534 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 CEBPZOSA8MTT3 80 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 HNRNPA2B1P22626 353 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 GABRA3P34903 492 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 ID2Q02363 134 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 MLC1Q15049 377 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 MEP1BQ16820 701 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 VWA1Q6PCB0 445 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 GPR148Q8TDV2 347 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 PTGES2Q9H7Z7 377 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 LIN7BQ9HAP6 207 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 OARD1Q9Y530 152 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TUBAL3A6NHL2 446 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 CST2P09228 141 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 GIPP09681 153 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 OR4Q2P0C623 313 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 BCKDHBP21953 392 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 CSF2RBP32927 897 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 LCN6P62502 163 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 FABP9Q0Z7S8 132 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SQSTM1Q13501 440 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 FAM209BQ5JX69 171 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TPRA1Q86W33 373 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SFT2D1Q8WV19 159 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SLC2A13Q96QE2 648 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 ZNF331Q9NQX6 463 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 DCAF13Q9NV06 445 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 OLAHQ9NV23 265 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 C2orf42Q9NWW7 574 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 MTCH1Q9NZJ7 389 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SH3BGRL2Q9UJC5 107 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 GJD2Q9UKL4 321 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SPHKAPQ2M3C7 1700 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 MEGF11A6BM72 1044 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 CDHR4A6H8M9 788 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 RNH1P13489 461 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 GDI1P31150 447 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TSFMP43897 325 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 MEF2AQ02078 507 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 PIN1Q13526 163 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 AAK1Q2M2I8 961 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SHEQ5VZ18 495 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TMEM217Q8N7C4 229 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SYT17Q9BSW7 474 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 SEMA4GQ9NTN9 838 aa8.13□□□□□ -1.11
ATXN3-216ENST00000545170 CFAP20Q9Y6A4 193 aaKnown RBP8.13□□□□□ -1.11
ATXN3-216ENST00000545170 TRAV34A0A0B4J273 112 aa8.12□□□□□ -1.11
ATXN3-216ENST00000545170 SCG5P05408 212 aa8.12□□□□□ -1.11
ATXN3-216ENST00000545170 TPOP07202 933 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms