RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 EPS8Q12929 822 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ELOAQ14241 798 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 QPRTQ15274 297 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GLYR1Q49A26 553 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 NEIL3Q8TAT5 605 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TMEM234Q8WY98 164 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PIGQQ9BRB3 760 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 RSPO3Q9BXY4 272 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 BAG5Q9UL15 447 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SH3GLB1Q9Y371 365 aa13.13□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SHANK1Q9Y566 2161 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SHISA8B8ZZ34 492 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SYT5O00445 386 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 AP3D1O14617 1153 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ADAM11O75078 769 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 STAMBPO95630 424 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 EPPINO95925 133 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 LGI1O95970 557 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GP1BBP13224 206 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PRG2P13727 222 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CD247P20963 164 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 EIF1P41567 113 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ACAA2P42765 397 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SELENOWP63302 87 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 FOXK1P85037 733 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 HOXC5Q00444 222 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 AAGABQ6PD74 315 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 COMTD1Q86VU5 262 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CADM2Q8N3J6 435 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GPR32P1Q8NGA4 272 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 OR10Q1Q8NGQ4 319 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 VANGL1Q8TAA9 524 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SLC35B4Q969S0 331 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CCDC124Q96CT7 223 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 NSMCE2Q96MF7 247 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 EVA1AQ9H8M9 152 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PLSCR2Q9NRY7 297 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 RPS6KA6Q9UK32 745 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SLC9A8Q9Y2E8 581 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SVILO95425 2214 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZNF407Q9C0G0 2248 aa13.12□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SPTA1P02549 2419 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 A0A1B0GVC2 190 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 NPIPA2E9PIF3 369 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 NPIPA3F8WFD2 350 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 M0R3H8 397 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 AQP7O14520 342 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ARPC2O15144 300 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GSC2O15499 205 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZNHIT1O43257 154 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ABOP16442 354 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZNF17P17021 662 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PRKCAP17252 672 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SESN3P58005 492 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 RBPJQ06330 500 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 FOXF1Q12946 379 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TRIM25Q14258 630 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 FXNQ16595 210 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 FKBP9P1Q75LS8 142 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 RANBP3LQ86VV4 465 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ST6GALNAC3Q8NDV1 305 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 OR52E4Q8NGH9 312 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ST8SIA1Q92185 356 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ABTB1Q969K4 478 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MIB2Q96AX9 1013 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SARAFQ96BY9 339 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MRGPRX4Q96LA9 322 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 RNF145Q96MT1 663 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CADM1Q9BY67 442 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MUC13Q9H3R2 512 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GORASP2Q9H8Y8 452 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SPRR3Q9UBC9 169 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TNFRSF10DQ9UBN6 386 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ACAD8Q9UKU7 415 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 FAM208BQ5VWN6 2430 aa13.11□□□□□ -0.31
TNFRSF1A-216ENST00000543995 DNAJC13O75165 2243 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 OR2M5A3KFT3 312 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 H3BML4 177 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 BMP7P18075 431 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TNFRSF1BP20333 461 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ADH6P28332 368 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PTGS2P35354 604 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GFRA1P56159 465 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 IGFBP7Q16270 282 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 POMZP3Q6PJE2 187 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CYP2R1Q6VVX0 501 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CBLL1Q75N03 491 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZNF605Q86T29 641 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ATCAYQ86WG3 371 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 DHFR2Q86XF0 187 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GTPBP8Q8N3Z3 284 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZNF524Q96C55 264 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 NPAS1Q99742 590 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ARHGDIGQ99819 225 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 UGT2B28Q9BY64 529 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 LRMDAQ9H2I8 198 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 DCAF13Q9NV06 445 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ACTR3BQ9P1U1 418 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 RPS6KB2Q9UBS0 482 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms