RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 CYTH4Q9UIA0 394 aa1.51□□□□□ -2.17
KNTC1-213ENST00000542727 ANAPC7Q9UJX3 599 aa1.51□□□□□ -2.17
KNTC1-213ENST00000542727 ANGPTL2Q9UKU9 493 aa1.51□□□□□ -2.17
KNTC1-213ENST00000542727 SMC3Q9UQE7 1217 aa1.51□□□□□ -2.17
KNTC1-213ENST00000542727 RNF6Q9Y252 685 aa1.51□□□□□ -2.17
KNTC1-213ENST00000542727 OARD1Q9Y530 152 aa1.51□□□□□ -2.17
KNTC1-213ENST00000542727 USP16Q9Y5T5 823 aa1.51□□□□□ -2.17
KNTC1-213ENST00000542727 CACNG2Q9Y698 323 aa1.51□□□□□ -2.17
KNTC1-213ENST00000542727 ATP8B3O60423 1300 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 IGHV1OR15-1A0A075B7D0 117 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 A0A1B0GUA9 196 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 LANCL1O43813 399 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 DFNA5O60443 496 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 IGHV3-48P01763 117 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 IGF1P05019 195 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 PDHBP11177 359 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 TOP1P11387 765 aaKnown RBP1.5□□□□□ -2.17
KNTC1-213ENST00000542727 TNNI3P19429 210 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 ATP6V1B2P21281 511 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 CCNCP24863 283 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 HTR1EP28566 365 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 RPS10P46783 165 aaKnown RBP1.5□□□□□ -2.17
KNTC1-213ENST00000542727 PRPS1P60891 318 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 EWSR1Q01844 656 aaKnown RBP eCLIP1.5□□□□□ -2.17
KNTC1-213ENST00000542727 MECOMQ03112 1051 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 UNC119Q13432 240 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 ARFRP1Q13795 201 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 NSDHLQ15738 373 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 USH1GQ495M9 461 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 LINC01620Q4KN68 170 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 EOGTQ5NDL2 527 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 LIPNQ5VXI9 398 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 LRRC8BQ6P9F7 803 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 BLOC1S2Q6QNY1 142 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 ARCQ7LC44 396 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 CATSPER4Q7RTX7 472 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 DPY19L4Q7Z388 723 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 C16orf62Q7Z3J2 963 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 KIAA1328Q86T90 577 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 TMEM17Q86X19 198 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 ARIH2OSQ8N7S6 290 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 ATP6V0D2Q8N8Y2 350 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 CCDC71LQ8N9Z2 235 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 C20orf203Q8NBC4 194 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 CNNM3Q8NE01 707 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 OR5AU1Q8NGC0 362 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 FBXO30Q8TB52 745 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 PNPT1Q8TCS8 783 aaKnown RBP1.5□□□□□ -2.17
KNTC1-213ENST00000542727 AENQ8WTP8 325 aaKnown RBP1.5□□□□□ -2.17
KNTC1-213ENST00000542727 FAM151AQ8WW52 585 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 RAPGEF5Q92565 580 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 FAM104AQ969W3 186 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 RAB7BQ96AH8 199 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 RPUSD4Q96CM3 377 aaKnown RBP1.5□□□□□ -2.17
KNTC1-213ENST00000542727 SLC6A7Q99884 636 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 SPATA16Q9BXB7 569 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 MAGT1Q9H0U3 335 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 NXF5Q9H1B4 397 aaKnown RBP1.5□□□□□ -2.17
KNTC1-213ENST00000542727 ECT2Q9H8V3 914 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 ZNF331Q9NQX6 463 aaPredicted RBP1.5□□□□□ -2.17
KNTC1-213ENST00000542727 TREM2Q9NZC2 230 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 BTNL2Q9UIR0 455 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 ZNF223Q9UK11 482 aaPredicted RBP1.5□□□□□ -2.17
KNTC1-213ENST00000542727 SPACA6W5XKT8 324 aa1.5□□□□□ -2.17
KNTC1-213ENST00000542727 NUP214P35658 2090 aaPredicted RBP1.5□□□□□ -2.17
KNTC1-213ENST00000542727 PLEKHG1Q9ULL1 1385 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 CLSPNQ9HAW4 1339 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 ESYT2A0FGR8 921 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 A8MUA0 341 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 CHADO15335 359 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 HCN1O60741 890 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 SLITRK3O94933 977 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 SNAPINO95295 136 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 GNA14O95837 355 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 CA1P00915 261 aaPredicted RBP1.49□□□□□ -2.17
KNTC1-213ENST00000542727 ALOX5P09917 674 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 RNH1P13489 461 aaKnown RBP1.49□□□□□ -2.17
KNTC1-213ENST00000542727 POLR2EP19388 210 aaKnown RBP1.49□□□□□ -2.17
KNTC1-213ENST00000542727 COX7A1P24310 79 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 ANXA13P27216 316 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 CCND2P30279 289 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 NUP107P57740 925 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 KRTAP10-10P60014 251 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 LRRC63Q05C16 580 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 CCDC173Q0VFZ6 552 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 INAQ16352 499 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 CCDC57Q2TAC2 916 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 PARP10Q53GL7 1025 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 FAHD2BQ6P2I3 314 aaPredicted RBP1.49□□□□□ -2.17
KNTC1-213ENST00000542727 FAM199XQ6PEV8 388 aaPredicted RBP1.49□□□□□ -2.17
KNTC1-213ENST00000542727 KCNIP4Q6PIL6 250 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 CCDC137Q6PK04 289 aaKnown RBP1.49□□□□□ -2.17
KNTC1-213ENST00000542727 WDR74Q6RFH5 385 aaPredicted RBP1.49□□□□□ -2.17
KNTC1-213ENST00000542727 CBLN3Q6UW01 205 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 UNQ9370/PRO34162Q6UXP9 181 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 ACOT7LQ6ZUV0 252 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 ACOT1Q86TX2 421 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 VRK2Q86Y07 508 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 KIR3DL3Q8N743 410 aa1.49□□□□□ -2.17
KNTC1-213ENST00000542727 ZNF433Q8N7K0 673 aaPredicted RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms