RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ADPRHP54922 357 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 RAE1P78406 368 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 FCN2Q15485 313 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 AKIRIN2Q53H80 203 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 IER5LQ5T953 404 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 METRNLQ641Q3 311 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 ELP2Q6IA86 826 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 OR5M10Q6IEU7 315 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 DOK6Q6PKX4 331 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 NXPE4Q6UWF7 544 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 LUZP2Q86TE4 346 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 Q8N402 240 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 MEIOBQ8N635 442 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 LRRC17Q8N6Y2 441 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 OR6X1Q8NH79 312 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 HRASLS5Q96KN8 279 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 LINC00052Q96N35 136 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 NRTNQ99748 197 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 C2orf88Q9BSF0 95 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 MED28Q9H204 178 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 PRO3102Q9H379 93 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 WDR26Q9H7D7 661 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 KCNK12Q9HB15 430 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 DUSP22Q9NRW4 184 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 TREM2Q9NZC2 230 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 NDUFAF4Q9P032 175 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 IL19Q9UHD0 177 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 SAMD4AQ9UPU9 718 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 MSRB2Q9Y3D2 182 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 OR1A2Q9Y585 309 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 FKBP7Q9Y680 259 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 CEP290O15078 2479 aa7.45□□□□□ -1.22
PDLIM5-221ENST00000542407 PROM1O43490 865 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 IFNA7P01567 189 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 STAG3L3P0CL85 134 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 SLC2A1P11166 492 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PSMA1P25786 263 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 AQP1P29972 269 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 CDC34P49427 236 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 VEGFCP49767 419 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 IKZF1Q13422 519 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 DOC2BQ14184 412 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 UGT8Q16880 541 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 GLYR1Q49A26 553 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 ZNF385CQ66K41 422 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 ATG9BQ674R7 924 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 HEPHL1Q6MZM0 1159 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 ZNF782Q6ZMW2 699 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PTCHD4Q6ZW05 846 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 ZNF367Q7RTV3 350 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 DCXRQ7Z4W1 244 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 AMZ2Q86W34 360 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 OR5AR1Q8NGP9 310 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 CSGALNACT1Q8TDX6 532 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 ELP5Q8TE02 316 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 ZBED6CLQ96FA7 236 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 FEVQ99581 238 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 GABARAPL1Q9H0R8 117 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 SEMA6CQ9H3T2 930 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 BRF2Q9HAW0 419 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 UBQLN2Q9UHD9 624 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 COLQQ9Y215 455 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 STARD10Q9Y365 291 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 TNRC18O15417 2968 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 DVL2O14641 736 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 LYRM1O43325 122 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 DNAJB6O75190 326 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 KLF8O95600 359 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 CRYABP02511 175 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 C1QCP02747 245 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 C9P02748 559 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 ADRA2AP08913 450 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PF4V1P10720 104 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 HSD3B1P14060 373 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PRPS1L1P21108 318 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 IGFALSP35858 605 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 GGT2P36268 569 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PNLIPRP1P54315 467 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 CAV3P56539 151 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 RPS26P62854 115 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 RPS21P63220 83 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 STX4Q12846 297 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 MTAPQ13126 283 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 IL18Q14116 193 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 LRRC32Q14392 662 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 KCNMB1Q16558 191 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 HKDC1Q2TB90 917 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 LRIF1Q5T3J3 769 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 KIAA1161Q6NSJ0 714 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 NOXRED1Q6NXP6 359 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 LAS2Q8IYD9 372 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 ZZZ3Q8IYH5 903 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 GJD3Q8N144 294 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 OR1M1Q8NGA1 313 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 OR9Q1Q8NGQ5 310 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 MAFIPQ8WZ33 124 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 NSMAFQ92636 917 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 HSH2DQ96JZ2 352 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 GPR137Q96N19 417 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 MTERF1Q99551 399 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms