RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 KIF2AO00139 706 aaPredicted RBP13.56□□□□□ -0.24
PAAF1-211ENST00000542293 PDLIM1O00151 329 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 KCNH1O95259 989 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 PDYNP01213 254 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 GAAP10253 952 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 ADRA2CP18825 462 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 MPIP34949 423 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 ILF2Q12905 390 aaKnown RBP13.56□□□□□ -0.24
PAAF1-211ENST00000542293 TRAF3Q13114 568 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 ZNHIT3Q15649 155 aaPredicted RBP13.56□□□□□ -0.24
PAAF1-211ENST00000542293 TOMM34Q15785 309 aaPredicted RBP13.56□□□□□ -0.24
PAAF1-211ENST00000542293 VHLLQ6RSH7 139 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 OR2L13Q8N349 312 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 TEX29Q8N6K0 151 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 OR52E4Q8NGH9 312 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 GRK7Q8WTQ7 553 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 C22orf15Q8WYQ4 148 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 ATP6V1E2Q96A05 226 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 DUX5Q96PT3 197 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 TMPRSS13Q9BYE2 586 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 RACGAP1Q9H0H5 632 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 WNK2Q9Y3S1 2297 aa13.56□□□□□ -0.24
PAAF1-211ENST00000542293 IGKV3D-15A0A087WSY6 115 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 TRAV20A0A0B4J274 112 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 IGHV1-18A0A0C4DH31 117 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 SYCE1LA8MT33 242 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 MYO1GB0I1T2 1018 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 OIP5O43482 229 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 JUNP05412 331 aaKnown RBP13.55□□□□□ -0.24
PAAF1-211ENST00000542293 SLC7A1P30825 629 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 CCNG1P51959 295 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 IL13RA1P78552 427 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 ZNF117Q03924 483 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 C1QL4Q86Z23 238 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 C17orf78Q8N4C9 275 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 BBS4Q96RK4 519 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 DOK1Q99704 481 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 C3orf14Q9HBI5 128 aa13.55□□□□□ -0.24
PAAF1-211ENST00000542293 NOSIPQ9Y314 301 aaKnown RBP13.55□□□□□ -0.24
PAAF1-211ENST00000542293 ZNF716A6NP11 495 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 hCG_2039718K7EN88 272 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 H6PDO95479 791 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 TFP02787 698 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 RBMXP38159 391 aaKnown RBP13.54□□□□□ -0.24
PAAF1-211ENST00000542293 FNTAP49354 379 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 NCBP2P52298 156 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■□□□ 12.6
PAAF1-211ENST00000542293 LMO4P61968 165 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 RAE1P78406 368 aaKnown RBP13.54□□□□□ -0.24
PAAF1-211ENST00000542293 IL1RL1Q01638 556 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 SRSF4Q08170 494 aaKnown RBP13.54□□□□□ -0.24
PAAF1-211ENST00000542293 ADRM1Q16186 407 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 ABLIM2Q6H8Q1 611 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 RAPH1Q70E73 1250 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 ZNF527Q8NB42 609 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 RHEBL1Q8TAI7 183 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 RNF217Q8TC41 542 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 GPR151Q8TDV0 419 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 LRRC58Q96CX6 371 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 NSUN5Q96P11 429 aaKnown RBP13.54□□□□□ -0.24
PAAF1-211ENST00000542293 ELOVL6Q9H5J4 265 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 NTN4Q9HB63 628 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 DDX18Q9NVP1 670 aaKnown RBP13.54□□□□□ -0.24
PAAF1-211ENST00000542293 EMC3Q9P0I2 261 aa13.54□□□□□ -0.24
PAAF1-211ENST00000542293 PDP1Q9P0J1 537 aaPredicted RBP13.54□□□□□ -0.24
PAAF1-211ENST00000542293 FBXO9Q9UK97 447 aaPredicted RBP13.54□□□□□ -0.24
PAAF1-211ENST00000542293 TMEM129A0AVI4 362 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 ERCC1P07992 297 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-211ENST00000542293 NUDT7P0C024 238 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 SAGP10523 405 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-211ENST00000542293 PRKCAP17252 672 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 PRTN3P24158 256 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 GCH1P30793 250 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 MAP3K8P41279 467 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 PRPS1P60891 318 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 SELENBP1Q13228 472 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 TSNAXIP1Q2TAA8 658 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 CBLN3Q6UW01 205 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 MISPQ8IVT2 679 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 CENPLQ8N0S6 344 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-211ENST00000542293 C1orf162Q8NEQ5 155 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-211ENST00000542293 OR4F6Q8NGB9 312 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 C16orf78Q8WTQ4 265 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 SELENOMQ8WWX9 145 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 ELP4Q96EB1 424 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 C1orf147Q96MC9 270 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-211ENST00000542293 CPNE1Q99829 537 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 MMP27Q9H306 513 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 BRF2Q9HAW0 419 aa13.53□□□□□ -0.24
PAAF1-211ENST00000542293 CPSF2Q9P2I0 782 aaKnown RBP13.53□□□□□ -0.24
PAAF1-211ENST00000542293 TNPO3Q9Y5L0 923 aaKnown RBP13.53□□□□□ -0.24
PAAF1-211ENST00000542293 GPC6Q9Y625 555 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-211ENST00000542293 KLF11O14901 512 aa13.52□□□□□ -0.25
PAAF1-211ENST00000542293 SLITRK5O94991 958 aa13.52□□□□□ -0.25
PAAF1-211ENST00000542293 PRSS23O95084 383 aa13.52□□□□□ -0.25
PAAF1-211ENST00000542293 NKX2-2O95096 273 aa13.52□□□□□ -0.25
PAAF1-211ENST00000542293 NUDT14O95848 222 aa13.52□□□□□ -0.25
PAAF1-211ENST00000542293 MDKP21741 143 aaPredicted RBP13.52□□□□□ -0.25
PAAF1-211ENST00000542293 SLC1A3P43003 542 aa13.52□□□□□ -0.25
PAAF1-211ENST00000542293 GPR6P46095 362 aaPredicted RBP13.52□□□□□ -0.25
PAAF1-211ENST00000542293 ZNF75DP51815 510 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms