RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SOAT1P35610 550 aa17.65■□□□□ 0.42
DDX11-220ENST00000542244 EIF1P41567 113 aaKnown RBP17.65■□□□□ 0.42
DDX11-220ENST00000542244 GPR68Q15743 365 aa17.65■□□□□ 0.42
DDX11-220ENST00000542244 TAB1Q15750 504 aa17.65■□□□□ 0.42
DDX11-220ENST00000542244 MAPK14Q16539 360 aa17.65■□□□□ 0.42
DDX11-220ENST00000542244 FCRLAQ7L513 359 aa17.65■□□□□ 0.42
DDX11-220ENST00000542244 SFXN5Q8TD22 340 aa17.65■□□□□ 0.42
DDX11-220ENST00000542244 ZFP90Q8TF47 636 aa17.65■□□□□ 0.42
DDX11-220ENST00000542244 DNAJA3Q96EY1 480 aa17.65■□□□□ 0.42
DDX11-220ENST00000542244 ZNF300Q96RE9 604 aaPredicted RBP17.65■□□□□ 0.42
DDX11-220ENST00000542244 ZNF701Q9NV72 531 aaPredicted RBP17.65■□□□□ 0.42
DDX11-220ENST00000542244 ABCA2Q9BZC7 2435 aa17.64■□□□□ 0.42
DDX11-220ENST00000542244 SMAD9O15198 467 aaKnown RBP17.64■□□□□ 0.41
DDX11-220ENST00000542244 CCR4P51679 360 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 PLAURQ03405 335 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 PDSS1Q5T2R2 415 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 SFRP5Q5T4F7 317 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 C6orf120Q7Z4R8 191 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 RIBC1Q8N443 379 aaPredicted RBP17.64■□□□□ 0.41
DDX11-220ENST00000542244 TMCO5AQ8N6Q1 288 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 ZNF781Q8N8C0 355 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 MAPK1IP1LQ8NDC0 245 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 OR5W2Q8NH69 310 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 AENQ8WTP8 325 aaKnown RBP17.64■□□□□ 0.41
DDX11-220ENST00000542244 ZNF75CPQ92670 426 aaPredicted RBP17.64■□□□□ 0.41
DDX11-220ENST00000542244 CPNE4Q96A23 557 aaPredicted RBP17.64■□□□□ 0.41
DDX11-220ENST00000542244 THUMPD3Q9BV44 507 aaKnown RBP17.64■□□□□ 0.41
DDX11-220ENST00000542244 BHLHE41Q9C0J9 482 aaPredicted RBP17.64■□□□□ 0.41
DDX11-220ENST00000542244 MKLN1Q9UL63 735 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 LAMP3Q9UQV4 416 aa17.64■□□□□ 0.41
DDX11-220ENST00000542244 GPC6Q9Y625 555 aaPredicted RBP17.64■□□□□ 0.41
DDX11-220ENST00000542244 SERINC4A6NH21 518 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 INAFM1C9JVW0 142 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 SCN2BO60939 215 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 UGT2B17O75795 530 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 CYP7B1O75881 506 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 HSPA4LO95757 839 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 SOD3P08294 240 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 PRPS1L1P21108 318 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 MATN1P21941 496 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 ADH6P28332 368 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 RPL3P39023 403 aaKnown RBP17.63■□□□□ 0.41
DDX11-220ENST00000542244 CLDN8P56748 225 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 KRTAP1-1Q07627 177 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 SKP2Q13309 424 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 PDCD2Q16342 344 aaPredicted RBP17.63■□□□□ 0.41
DDX11-220ENST00000542244 LSM12Q3MHD2 195 aaKnown RBP17.63■□□□□ 0.41
DDX11-220ENST00000542244 SLC25A53Q5H9E4 307 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 TMEM201Q5SNT2 666 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 STK32CQ86UX6 486 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 ANKRD46Q86W74 232 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 ZNF611Q8N823 705 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 ZNF527Q8NB42 609 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 RAB8BQ92930 207 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 ZG16BQ96DA0 208 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 PSD2Q9BQI7 771 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 BDH2Q9BUT1 245 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 HOXD1Q9GZZ0 328 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 AKTIPQ9H8T0 292 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 CSPG4Q6UVK1 2322 aa17.63■□□□□ 0.41
DDX11-220ENST00000542244 ANK3Q12955 4377 aaKnown RBP17.62■□□□□ 0.41
DDX11-220ENST00000542244 PRAMEF27A3QJZ7 478 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 DPRXA6NFQ7 191 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 ETV2O00321 342 aaPredicted RBP17.62■□□□□ 0.41
DDX11-220ENST00000542244 CLOCKO15516 846 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 ZNF264O43296 627 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 PRKD3O94806 890 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 YES1P07947 543 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 UBL4AP11441 157 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 PAX1P15863 534 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 SUMO3P55854 103 aaPredicted RBP17.62■□□□□ 0.41
DDX11-220ENST00000542244 EMX2Q04743 252 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 IFFO1Q0D2I5 559 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 FUT5Q11128 374 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 TNK1Q13470 666 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 RNPS1Q15287 305 aaKnown RBP17.62■□□□□ 0.41
DDX11-220ENST00000542244 TIGD2Q4W5G0 525 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 NCMAPQ5T1S8 102 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 TMEM171Q8WVE6 324 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 MRGPRX4Q96LA9 322 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 OR51I1Q9H343 314 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 ATAD3AQ9NVI7 634 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.62■□□□□ 0.41
DDX11-220ENST00000542244 V9GYY5 206 aaPredicted RBP17.62■□□□□ 0.41
DDX11-220ENST00000542244 TLN2Q9Y4G6 2542 aa17.62■□□□□ 0.41
DDX11-220ENST00000542244 RNF103-CHMP3A0A140T963 221 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 CLDN24A6NM45 220 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 H3BNH8 94 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 DNAJA2O60884 412 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 ADAM11O75078 769 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 NDUFS7O75251 213 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 LYZL6O75951 148 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 OR12D1P0DN82 309 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 PTNP21246 168 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 NTF4P34130 210 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 ATP5J2P56134 94 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 SESN3P58005 492 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 C21orf58P58505 322 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 SELENBP1Q13228 472 aa17.61■□□□□ 0.41
DDX11-220ENST00000542244 MPP2Q14168 576 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms