RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ATCAYQ86WG3 371 aa15□□□□□ -0.01
VARS2-212ENST00000542001 ALDH16A1Q8IZ83 802 aa15□□□□□ -0.01
VARS2-212ENST00000542001 ADGRF3Q8IZF5 1079 aa15□□□□□ -0.01
VARS2-212ENST00000542001 OR2L8Q8NGY9 312 aa15□□□□□ -0.01
VARS2-212ENST00000542001 PMM1Q92871 262 aa15□□□□□ -0.01
VARS2-212ENST00000542001 S100A16Q96FQ6 103 aaKnown RBP15□□□□□ -0.01
VARS2-212ENST00000542001 NMNAT3Q96T66 252 aa15□□□□□ -0.01
VARS2-212ENST00000542001 PLEKHA1Q9HB21 404 aa15□□□□□ -0.01
VARS2-212ENST00000542001 VDAC3Q9Y277 283 aa15□□□□□ -0.01
VARS2-212ENST00000542001 C2orf72A6NCS6 295 aa15□□□□□ -0.01
VARS2-212ENST00000542001 CASC3O15234 703 aaKnown RBP15□□□□□ -0.01
VARS2-212ENST00000542001 DNASE1P24855 282 aa15□□□□□ -0.01
VARS2-212ENST00000542001 FAUP35544 74 aaKnown RBP15□□□□□ -0.01
VARS2-212ENST00000542001 TGFBR2P37173 567 aa15□□□□□ -0.01
VARS2-212ENST00000542001 ATAD3CQ5T2N8 411 aa15□□□□□ -0.01
VARS2-212ENST00000542001 BTN2A1Q7KYR7 527 aa15□□□□□ -0.01
VARS2-212ENST00000542001 ZNF619Q8N2I2 560 aa15□□□□□ -0.01
VARS2-212ENST00000542001 LINC01555Q8NAE3 123 aa15□□□□□ -0.01
VARS2-212ENST00000542001 BCL7BQ9BQE9 202 aa15□□□□□ -0.01
VARS2-212ENST00000542001 THAP7Q9BT49 309 aaPredicted RBP15□□□□□ -0.01
VARS2-212ENST00000542001 AKAP7Q9P0M2 348 aaPredicted RBP15□□□□□ -0.01
VARS2-212ENST00000542001 TEX13CA0A0J9YWL9 993 aa15□□□□□ -0.01
VARS2-212ENST00000542001 DCDC2BA2VCK2 349 aa15□□□□□ -0.01
VARS2-212ENST00000542001 ZAR1LA6NP61 321 aa15□□□□□ -0.01
VARS2-212ENST00000542001 LINC01565O15544 149 aa15□□□□□ -0.01
VARS2-212ENST00000542001 GPR75O95800 540 aa15□□□□□ -0.01
VARS2-212ENST00000542001 OR8G3PP0DMU2 310 aa15□□□□□ -0.01
VARS2-212ENST00000542001 NUP62P37198 522 aaPredicted RBP15□□□□□ -0.01
VARS2-212ENST00000542001 BAK1Q16611 211 aa15□□□□□ -0.01
VARS2-212ENST00000542001 XKRXQ6PP77 449 aa15□□□□□ -0.01
VARS2-212ENST00000542001 SLC35D2Q76EJ3 337 aa15□□□□□ -0.01
VARS2-212ENST00000542001 CCDC71Q8IV32 467 aaPredicted RBP15□□□□□ -0.01
VARS2-212ENST00000542001 KDM8Q8N371 416 aa15□□□□□ -0.01
VARS2-212ENST00000542001 AKAP1Q92667 903 aaKnown RBP eCLIP15□□□□□ -0.01
VARS2-212ENST00000542001 OPALINQ96PE5 141 aa15□□□□□ -0.01
VARS2-212ENST00000542001 SERINC2Q96SA4 455 aa15□□□□□ -0.01
VARS2-212ENST00000542001 CNN2Q99439 309 aaKnown RBP15□□□□□ -0.01
VARS2-212ENST00000542001 GPN1Q9HCN4 374 aaPredicted RBP15□□□□□ -0.01
VARS2-212ENST00000542001 GALNT9Q9HCQ5 603 aa15□□□□□ -0.01
VARS2-212ENST00000542001 PDE7BQ9NP56 450 aa15□□□□□ -0.01
VARS2-212ENST00000542001 DIABLOQ9NR28 239 aa15□□□□□ -0.01
VARS2-212ENST00000542001 PCDHGB1Q9Y5G3 927 aa15□□□□□ -0.01
VARS2-212ENST00000542001 SULT1C4O75897 302 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 KRT33AO76009 404 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 PRKXP51817 358 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 CDKN3Q16667 212 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 KLHL26Q53HC5 615 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 AGAP7PQ5VUJ5 663 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 FAM205BPQ63HN1 556 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 PRSS45Q7RTY3 260 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 ZNF550Q7Z398 422 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 MCATQ8IVS2 390 aaKnown RBP14.99□□□□□ -0.01
VARS2-212ENST00000542001 OR13H1Q8NG92 308 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 OR2T35Q8NGX2 323 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 LRRC20Q8TCA0 184 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 RSC1A1Q92681 617 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 GHSRQ92847 366 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 GPR55Q9Y2T6 319 aaPredicted RBP14.99□□□□□ -0.01
VARS2-212ENST00000542001 GATBO75879 557 aaKnown RBP14.99□□□□□ -0.01
VARS2-212ENST00000542001 EGFP01133 1207 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 GP1BBP13224 206 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 GDI2P50395 445 aaKnown RBP14.99□□□□□ -0.01
VARS2-212ENST00000542001 AGERQ15109 404 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 LAIR1Q6GTX8 287 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 SLC29A4Q7RTT9 530 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 GRPEL2Q8TAA5 225 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 DEDD2Q8WXF8 326 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 TANKQ92844 425 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 MICU1Q9BPX6 476 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 ZNF639Q9UID6 485 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 ICKQ9UPZ9 632 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 ADAM18Q9Y3Q7 739 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 C17orf105B2RV13 164 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 NARSO43776 548 aaKnown RBP14.99□□□□□ -0.01
VARS2-212ENST00000542001 PLATP00750 562 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 MAOAP21397 527 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 SRP9P49458 86 aaKnown RBP14.99□□□□□ -0.01
VARS2-212ENST00000542001 PITPNAQ00169 270 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 MYADMQ96S97 322 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 CMKLR1Q99788 373 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 AKIP1Q9NQ31 210 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 RDH8Q9NYR8 311 aa14.99□□□□□ -0.01
VARS2-212ENST00000542001 TDRD15B5MCY1 1934 aaKnown RBP14.99□□□□□ -0.01
VARS2-212ENST00000542001 TDRD6O60522 2096 aaKnown RBP14.98□□□□□ -0.01
VARS2-212ENST00000542001 TRBV5-3A0A0A0MS03 114 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 AHSA1O95433 338 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 GALK2Q01415 458 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 PLCXD2Q0VAA5 305 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 SAXO2Q658L1 398 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 MFSD12Q6NUT3 480 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 PRSS41Q7RTY9 318 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 TMEM99Q8N816 258 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 GDPD1Q8N9F7 314 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 FAM3CQ92520 227 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 BCL2L14Q9BZR8 327 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 EXO5Q9H790 373 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 RXFP3Q9NSD7 469 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 PCDHGA3Q9Y5H0 932 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 PAPPA2Q9BXP8 1791 aa14.98□□□□□ -0.01
VARS2-212ENST00000542001 NDUFB2O95178 105 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms