RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 GEMIN6Q8WXD5 167 aaKnown RBP7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 CNOT9Q92600 299 aaKnown RBP7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 TFAP2CQ92754 450 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 ADIPOR1Q96A54 375 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 SH3YL1Q96HL8 342 aaPredicted RBP7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 ZNF354BQ96LW1 612 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 DEPDC7Q96QD5 511 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 ZNF300Q96RE9 604 aaPredicted RBP7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 LMF2Q9BU23 707 aaKnown RBP7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 BDH2Q9BUT1 245 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 BTBD2Q9BX70 525 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 WWTR1Q9GZV5 400 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 MAGIXQ9H6Y5 334 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 ZBTB20Q9HC78 741 aaPredicted RBP7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 DUSP22Q9NRW4 184 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 THUMPD1Q9NXG2 353 aaKnown RBP7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 ANKRD10Q9NXR5 420 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 AKAP7Q9P0M2 348 aaPredicted RBP7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 BAG5Q9UL15 447 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 LYVE1Q9Y5Y7 322 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 HS3ST3B1Q9Y662 390 aa7.1□□□□□ -1.27
AC005840.3-201ENST00000541888 CCDC187A0A096LP49 1063 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 LOC101059948A0A1B0GTJ6 334 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 AGAP5A6NIR3 686 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 TMEM200CA6NKL6 621 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 DUXAA6NLW8 204 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 B4E171 279 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 C9J4A7 227 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 AP3D1O14617 1153 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 KIAA0513O60268 411 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 ICOSLGO75144 302 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 REM1O75628 298 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 ATE1O95260 518 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 LGI1O95970 557 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 THY1P04216 161 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 IGFBP1P08833 259 aaPredicted RBP7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 FUT1P19526 365 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 CCNA2P20248 432 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 HTR2AP28223 471 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 TSPAN7P41732 249 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 ANXA11P50995 505 aaKnown RBP7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 DAPP51397 102 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 GPR143P51810 404 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 FBXW4P57775 412 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 ARPC4P59998 168 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 RNF4P78317 190 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 GABREP78334 506 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 E2F1Q01094 437 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 NFATC3Q12968 1075 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 RAPSNQ13702 412 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 NHSL2Q5HYW2 709 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 ZNF362Q5T0B9 420 aaPredicted RBP7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 TTC33Q6PID6 262 aaPredicted RBP7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 KLHL17Q6TDP4 642 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 C6orf15Q6UXA7 325 aaPredicted RBP7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 VASH2Q86V25 355 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 CYP4Z1Q86W10 505 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 ZNF619Q8N2I2 560 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 CHDHQ8NE62 594 aaPredicted RBP7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 NFAM1Q8NET5 270 aaPredicted RBP7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 GRHL3Q8TE85 626 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 RAB2BQ8WUD1 216 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 DAZLQ92904 295 aaKnown RBP7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 NRBF2Q96F24 287 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 LIN37Q96GY3 246 aaPredicted RBP7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 TAAR9Q96RI9 348 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 NIPSNAP1Q9BPW8 284 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 DCUN1D5Q9BTE7 237 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 REEP1Q9H902 201 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 ZNF160Q9HCG1 818 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 BCL2L10Q9HD36 194 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 Q9N2J8 555 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 ACER3Q9NUN7 267 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 COPS7AQ9UBW8 275 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 IL17BQ9UHF5 180 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 PADI1Q9ULC6 663 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 A4GNTQ9UNA3 340 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 PADI2Q9Y2J8 665 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 ENPP4Q9Y6X5 453 aa7.09□□□□□ -1.27
AC005840.3-201ENST00000541888 NCKAP5O14513 1909 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 BLACEA4D250 179 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 SAGE2PA6NJ88 616 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 TNFRSF11BO00300 401 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 SCO2O43819 266 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 PIP5K1CO60331 668 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 PDE9AO76083 593 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 GADD45GO95257 159 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 RASAL1O95294 804 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 BCL10O95999 233 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 ALPLP05186 524 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 HBQ1P09105 142 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 GSTP1P09211 210 aaKnown RBP7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 FCGR1AP12314 374 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 ABCD3P28288 659 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 DLSTP36957 453 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 PCYT1AP49585 367 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 CCR4P51679 360 aa7.08□□□□□ -1.28
AC005840.3-201ENST00000541888 RGS8P57771 180 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms