RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PAPOLBQ9NRJ5 636 aaKnown RBP25.43■■□□□ 1.66
CCM2-218ENST00000541586 MAN1A2O60476 641 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 ADAM11O75078 769 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 POU2F1P14859 743 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 OR1Q1Q15612 314 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 FNDC7Q5VTL7 733 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 APOOLQ6UXV4 268 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 GTPBP3Q969Y2 492 aaKnown RBP25.43■■□□□ 1.66
CCM2-218ENST00000541586 SLC35A3Q9Y2D2 325 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 POFUT2Q9Y2G5 429 aa25.43■■□□□ 1.66
CCM2-218ENST00000541586 LOC100130705A0A1B0GUX0 176 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 ADH7P40394 386 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 ACAA2P42765 397 aaKnown RBP25.42■■□□□ 1.66
CCM2-218ENST00000541586 CHN2P52757 468 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 SOX8P57073 446 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 NDUFAF6Q330K2 333 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 AGAP7PQ5VUJ5 663 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 KRT80Q6KB66 452 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 LINC00696Q6ZRV3 163 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 OR4K5Q8NGD3 323 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 SLC38A4Q969I6 547 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 AGAP4Q96P64 663 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 ZNF559Q9BR84 538 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 ARHGAP9Q9BRR9 750 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 GRIP2Q9C0E4 1043 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 STMN3Q9NZ72 180 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 MYOTQ9UBF9 498 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 SLC7A7Q9UM01 511 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 NPFFR2Q9Y5X5 522 aa25.42■■□□□ 1.66
CCM2-218ENST00000541586 A0A087WUU8 490 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 TRAPPC13A5PLN9 417 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 SLC16A6O15403 523 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 ZNF354AO60765 605 aaPredicted RBP25.41■■□□□ 1.66
CCM2-218ENST00000541586 UGT2B11O75310 529 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 CD226Q15762 336 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 H3F3CQ6NXT2 135 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 PGBD2Q6P3X8 592 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 ZNF550Q7Z398 422 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 GATSQ8NAP1 163 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 MUS81Q96NY9 551 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 ZNF552Q9H707 407 aaPredicted RBP25.41■■□□□ 1.66
CCM2-218ENST00000541586 TEKT2Q9UIF3 430 aa25.41■■□□□ 1.66
CCM2-218ENST00000541586 EIF4E1BA6NMX2 242 aaKnown RBP25.4■■□□□ 1.66
CCM2-218ENST00000541586 ITGB2P05107 769 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 LSM11P83369 360 aaKnown RBP eCLIP25.4■■□□□ 1.66
CCM2-218ENST00000541586 NPRL3Q12980 569 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 NKAIN4Q8IVV8 208 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 LINC00471Q8N535 108 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 GABARAPL3Q9BY60 117 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 ZBTB20Q9HC78 741 aaPredicted RBP25.4■■□□□ 1.66
CCM2-218ENST00000541586 MGAT4BQ9UQ53 548 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 OR6C70A6NIJ9 312 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 ITGA10O75578 1167 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 OR2J2O76002 312 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 NADKO95544 446 aaPredicted RBP25.4■■□□□ 1.66
CCM2-218ENST00000541586 NTN1O95631 604 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 ADAP00813 363 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 LYNP07948 512 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 EPHA2P29317 976 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 MEP1AQ16819 746 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 ABHD17BQ5VST6 288 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 FAM71CQ8NEG0 241 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 PHOSPHO1Q8TCT1 267 aa25.4■■□□□ 1.66
CCM2-218ENST00000541586 MAGEA13PA6NCF6 341 aa25.39■■□□□ 1.65
CCM2-218ENST00000541586 PPM1BO75688 479 aa25.39■■□□□ 1.65
CCM2-218ENST00000541586 F10P00742 488 aa25.39■■□□□ 1.65
CCM2-218ENST00000541586 NGFRP08138 427 aa25.39■■□□□ 1.65
CCM2-218ENST00000541586 MYBPC1Q00872 1141 aa25.39■■□□□ 1.65
CCM2-218ENST00000541586 ACER2Q5QJU3 275 aa25.39■■□□□ 1.65
CCM2-218ENST00000541586 ISLR2Q6UXK2 745 aa25.39■■□□□ 1.65
CCM2-218ENST00000541586 TMEM27Q9HBJ8 222 aa25.39■■□□□ 1.65
CCM2-218ENST00000541586 BCKDKO14874 412 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 LYPD3O95274 346 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 UBL4AP11441 157 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 CLK3P49761 638 aaKnown RBP25.38■■□□□ 1.65
CCM2-218ENST00000541586 MLF1P58340 268 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 ZNF613Q6PF04 617 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 KLHL17Q6TDP4 642 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 ZNF730Q6ZMV8 503 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 ZER1Q7Z7L7 766 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 TOR1AIP2Q8NFQ8 470 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 DGCR6LQ9BY27 220 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 RTN4RQ9BZR6 473 aa25.38■■□□□ 1.65
CCM2-218ENST00000541586 MKRN2OSH3BPM6 223 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 RYKP34925 604 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 UGT2B15P54855 530 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 SWT1Q5T5J6 900 aaKnown RBP25.37■■□□□ 1.65
CCM2-218ENST00000541586 ZNF440Q8IYI8 595 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 PARP8Q8N3A8 854 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 POGLUT1Q8NBL1 392 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 TMEM255BQ8WV15 326 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 ACOT11Q8WXI4 607 aaPredicted RBP25.37■■□□□ 1.65
CCM2-218ENST00000541586 PRSS27Q9BQR3 290 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 TRIM2Q9C040 744 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 PNPLA3Q9NST1 481 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 ANKRD10Q9NXR5 420 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 A0A1W2PQD3 144 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 ALG1L2C9J202 215 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 E9PQ18 207 aa25.37■■□□□ 1.65
CCM2-218ENST00000541586 H3BNH8 94 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms