RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-219	ENST00000541513	GTF2B	Q00403	316 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	KLC1	Q07866	573 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	MFGE8	Q08431	387 aa	Predicted RBP	4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	DYNC1I2	Q13409	638 aa	Known RBP	4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	KLHL38	Q2WGJ6	581 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	BEAN1	Q3B7T3	259 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	TMEM31	Q5JXX7	168 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	DOK6	Q6PKX4	331 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	ZNF841	Q6ZN19	808 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	SLC26A9	Q7LBE3	791 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	SNX20	Q7Z614	316 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	PATL1	Q86TB9	770 aa	Known RBP	4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	KCNMB4	Q86W47	210 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	SFR1	Q86XK3	245 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	ZNF677	Q86XU0	584 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	APLF	Q8IW19	511 aa	Predicted RBP	4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	MMD2	Q8IY49	270 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	CLDN19	Q8N6F1	224 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	LRRC57	Q8N9N7	239 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	TMEM161B	Q8NDZ6	487 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	OR8K1	Q8NGG5	319 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	TANK	Q92844	425 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	PELI1	Q96FA3	418 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	ZNF578	Q96N58	590 aa	Predicted RBP	4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	COPS8	Q99627	209 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	MAP3K3	Q99759	626 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	ROGDI	Q9GZN7	287 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	VN1R1	Q9GZP7	353 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	OR2AG1	Q9H205	316 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	ARRDC1-AS1	Q9H2J1	176 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	PRO3102	Q9H379	93 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	LRRN3	Q9H3W5	708 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	RIMS4	Q9H426	269 aa	Predicted RBP	4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	GOLPH3	Q9H4A6	298 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	C12orf4	Q9NQ89	552 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	TXLNG	Q9NUQ3	528 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	ZNF701	Q9NV72	531 aa	Predicted RBP	4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	LYAR	Q9NX58	379 aa	Known RBP	4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	LCMT1	Q9UIC8	334 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	MRTO4	Q9UKD2	239 aa	Known RBP	4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	PILRA	Q9UKJ1	303 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	ST3GAL5	Q9UNP4	418 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	DIMT1	Q9UNQ2	313 aa	Known RBP	4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	CACNG2	Q9Y698	323 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	ADGRA3	Q8IWK6	1321 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	CNTNAP2	Q9UHC6	1331 aa		4.97	□□□□□ -1.61
DDB1-219	ENST00000541513	COL4A6	Q14031	1691 aa		4.96	□□□□□ -1.61
DDB1-219	ENST00000541513	MYO7A	Q13402	2215 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	ZMYM2	Q9UBW7	1377 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	TEX51	A0A1B0GUA7	166 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513		A0A1W2PPC1	479 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	TCRBV5S1A1T	A0A578	114 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513		K7ERI5	159 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	RNASET2	O00584	256 aa	Known RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	FBP2	O00757	339 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	ARPC2	O15144	300 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	SLC16A4	O15374	487 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	LAT	O43561	262 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	BUD23	O43709	281 aa	Known RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	TSPAN2	O60636	221 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	UGDH	O60701	494 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	SMIM24	O75264	130 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	ZBTB11	O95625	1053 aa	Predicted RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	PIGR	P01833	764 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	SERPIND1	P05546	499 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	SNRPA	P09012	282 aa	Known RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	CTSA	P10619	480 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	TCN1	P20061	433 aa	Predicted RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	TBXA2R	P21731	343 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	MMP11	P24347	488 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	HOXA9	P31269	272 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	CDH5	P33151	784 aa	Predicted RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	AHR	P35869	848 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	EMP2	P54851	167 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	PNOC	Q13519	176 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	GPR50	Q13585	617 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	GK3P	Q14409	553 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	PIGH	Q14442	188 aa	Predicted RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	OR1C1	Q15619	314 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	SGCA	Q16586	387 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	GLYR1	Q49A26	553 aa	Predicted RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	DNAL1	Q4LDG9	190 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	ENTPD8	Q5MY95	495 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	NT5DC1	Q5TFE4	455 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	ZNF776	Q68DI1	518 aa	Predicted RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	ZNF470	Q6ECI4	717 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	OR4A47	Q6IF82	309 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	RFWD3	Q6PCD5	774 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	ASCL4	Q6XD76	172 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	TMEM184A	Q6ZMB5	413 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	ZNF720	Q7Z2F6	126 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	RD3	Q7Z3Z2	195 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	DEFB128	Q7Z7B8	93 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	SLC26A11	Q86WA9	606 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	MAP7D3	Q8IWC1	876 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	GSPT2	Q8IYD1	628 aa	Known RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	SLC38A6	Q8IZM9	456 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	PELI3	Q8N2H9	469 aa		4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	CPSF7	Q8N684	471 aa	Known RBP	4.96	□□□□□ -1.62
DDB1-219	ENST00000541513	HORMAD2	Q8N7B1	307 aa		4.96	□□□□□ -1.62

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