RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 INTS12Q96CB8 462 aaKnown RBP12.84□□□□□ -0.35
LTBR-209ENST00000541102 C1GALT1C1Q96EU7 318 aa12.84□□□□□ -0.35
LTBR-209ENST00000541102 LRRC46Q96FV0 321 aa12.84□□□□□ -0.35
LTBR-209ENST00000541102 SH3YL1Q96HL8 342 aaPredicted RBP12.84□□□□□ -0.35
LTBR-209ENST00000541102 TRNT1Q96Q11 434 aaKnown RBP12.84□□□□□ -0.35
LTBR-209ENST00000541102 TM9SF2Q99805 663 aa12.84□□□□□ -0.35
LTBR-209ENST00000541102 G6PC3Q9BUM1 346 aa12.84□□□□□ -0.35
LTBR-209ENST00000541102 THUMPD3Q9BV44 507 aaKnown RBP12.84□□□□□ -0.35
LTBR-209ENST00000541102 SAP130Q9H0E3 1048 aa12.84□□□□□ -0.35
LTBR-209ENST00000541102 KAT8Q9H7Z6 458 aaKnown RBP12.84□□□□□ -0.35
LTBR-209ENST00000541102 MCCC2Q9HCC0 563 aa12.84□□□□□ -0.35
LTBR-209ENST00000541102 A4GALTQ9NPC4 353 aa12.84□□□□□ -0.35
LTBR-209ENST00000541102 UBQLN4Q9NRR5 601 aa12.84□□□□□ -0.35
LTBR-209ENST00000541102 EXD2Q9NVH0 621 aa12.84□□□□□ -0.35
LTBR-209ENST00000541102 CMTM6Q9NX76 183 aa12.84□□□□□ -0.35
LTBR-209ENST00000541102 DOCK7Q96N67 2140 aa12.83□□□□□ -0.35
LTBR-209ENST00000541102 CCT8L1PA6NM43 557 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 CLDN24A6NM45 220 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 ENO4A6NNW6 628 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 SHISA8B8ZZ34 492 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 EEF1E1-BLOC1S5C9J1V9 151 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 ALG1L2C9J202 215 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 H3BML4 177 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 SCDO00767 359 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 SEC14L5O43304 696 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 EEF1E1O43324 174 aaKnown RBP12.83□□□□□ -0.36
LTBR-209ENST00000541102 KIAA0513O60268 411 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 STX11O75558 287 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 UGT2B17O75795 530 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 NGFRP08138 427 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 T-ENOLP0DO92 83 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 ATP6V1C1P21283 382 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 NUDT2P50583 147 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 ATP12AP54707 1039 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 FADDQ13158 208 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 GANABQ14697 944 aaKnown RBP12.83□□□□□ -0.36
LTBR-209ENST00000541102 BCL2A1Q16548 175 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 AP1ARQ63HQ0 302 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 P4HA3Q7Z4N8 544 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 GCNT2Q8N0V5 402 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 OR10A6Q8NH74 314 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 NFKBIDQ8NI38 313 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 RNASE6Q93091 150 aaKnown RBP12.83□□□□□ -0.36
LTBR-209ENST00000541102 CMTM5Q96DZ9 223 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 TMEM19Q96HH6 336 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 KCNN3Q9UGI6 736 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 VDAC3Q9Y277 283 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 WDR45Q9Y484 360 aa12.83□□□□□ -0.36
LTBR-209ENST00000541102 IGLV3-32A0A0A0MS00 114 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 EVPLLA8MZ36 301 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 H0YC42 278 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 GCM2O75603 506 aaPredicted RBP12.82□□□□□ -0.36
LTBR-209ENST00000541102 RCBTB2O95199 551 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 TGM6O95932 706 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 AGR2O95994 175 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 AK1P00568 194 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 ARAFP10398 606 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 PPIBP23284 216 aaKnown RBP12.82□□□□□ -0.36
LTBR-209ENST00000541102 MAGEA8P43361 318 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 KIR2DL3P43628 341 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 SUCLG1P53597 346 aaKnown RBP12.82□□□□□ -0.36
LTBR-209ENST00000541102 TPD52P55327 224 aaPredicted RBP12.82□□□□□ -0.36
LTBR-209ENST00000541102 ZNF141Q15928 474 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 GLYR1Q49A26 553 aaPredicted RBP12.82□□□□□ -0.36
LTBR-209ENST00000541102 GCNT6Q5T4J0 391 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 LRRC74BQ6ZQY2 392 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 ADGRE4PQ86SQ3 457 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 CALHM3Q86XJ0 350 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 SLC15A3Q8IY34 581 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 ZZZ3Q8IYH5 903 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 ZNF619Q8N2I2 560 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 PCYOX1LQ8NBM8 494 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 PIGQQ9BRB3 760 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 RAD21L1Q9H4I0 556 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 EFCAB1Q9HAE3 211 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 SLC24A3Q9HC58 644 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 CLCF1Q9UBD9 225 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 P2RX2Q9UBL9 471 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 TAGLN3Q9UI15 199 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 ITGB1BP2Q9UKP3 347 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 LIPT1Q9Y234 373 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 L3MBTL1Q9Y468 752 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 DSPPQ9NZW4 1301 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 FBN2P35556 2912 aa12.82□□□□□ -0.36
LTBR-209ENST00000541102 SPG11Q96JI7 2443 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 CCDC168Q8NDH2 2452 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 LINC01387J3KSC0 135 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 NME4O00746 187 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 SOX30O94993 753 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 IL18BPO95998 194 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 NPPAP01160 153 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 RPS4Y1P22090 263 aaKnown RBP12.81□□□□□ -0.36
LTBR-209ENST00000541102 LCN1P31025 176 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 ANXA11P50995 505 aaKnown RBP12.81□□□□□ -0.36
LTBR-209ENST00000541102 CLDN15P56746 228 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 CLDN20P56880 219 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 EEFSECP57772 596 aaKnown RBP12.81□□□□□ -0.36
LTBR-209ENST00000541102 TXNL4AP83876 142 aaKnown RBP12.81□□□□□ -0.36
LTBR-209ENST00000541102 CBX1P83916 185 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 KRT72Q14CN4 511 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms