RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 KCNE5Q9UJ90 142 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 ZFHX3Q15911 3703 aa18.74■□□□□ 0.59
CHFR-217ENST00000540537 VPS13CQ709C8 3753 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 TMEM120BA0PK00 339 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 SDHDO14521 159 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 FCMRO60667 390 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 DNAJA2O60884 412 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 SNNO75324 88 aaPredicted RBP18.73■□□□□ 0.59
CHFR-217ENST00000540537 UGT2B17O75795 530 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 ALDOCP09972 364 aaKnown RBP18.73■□□□□ 0.59
CHFR-217ENST00000540537 OR12D1P0DN82 309 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 CCR4P51679 360 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 SLC18A1P54219 525 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 PPP2R2AP63151 447 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 SKP2Q13309 424 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 QPRTQ15274 297 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 EXOC3L2Q2M3D2 409 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 TMEM176BQ3YBM2 270 aaPredicted RBP18.73■□□□□ 0.59
CHFR-217ENST00000540537 FAM174BQ3ZCQ3 159 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 ATAD3BQ5T9A4 648 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 ZNF550Q7Z398 422 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 RFWD2Q8NHY2 731 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 ZFP90Q8TF47 636 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 SRXN1Q9BYN0 137 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 KLHL4Q9C0H6 718 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 AIG1Q9NVV5 245 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 BTNL2Q9UIR0 455 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 MKLN1Q9UL63 735 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 ACANP16112 2415 aa18.73■□□□□ 0.59
CHFR-217ENST00000540537 CENPVL1A0A0U1RR11 272 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 KIAA0513O60268 411 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 PPP3CBP16298 524 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 CD53P19397 219 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 AGTR1P30556 359 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 S100A3P33764 101 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 KHKP50053 298 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 CASP9P55211 416 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 RNPS1Q15287 305 aaKnown RBP18.72■□□□□ 0.59
CHFR-217ENST00000540537 AP1ARQ63HQ0 302 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 TNFAIP8L2Q6P589 184 aaPredicted RBP18.72■□□□□ 0.59
CHFR-217ENST00000540537 BEND4Q6ZU67 534 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 SPATA19Q7Z5L4 167 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 STK32CQ86UX6 486 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 RAB3IL1Q8TBN0 382 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 XAGE5Q8WWM1 108 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 ROBO4Q8WZ75 1007 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 ST8SIA1Q92185 356 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 ARL8AQ96BM9 186 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 ZNF524Q96C55 264 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 MARK4Q96L34 752 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 CCDC115Q96NT0 180 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 SLC35A5Q9BS91 424 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 COQ10BQ9H8M1 238 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 GP6Q9HCN6 339 aa18.72■□□□□ 0.59
CHFR-217ENST00000540537 BEX4Q9NWD9 120 aaPredicted RBP18.72■□□□□ 0.59
CHFR-217ENST00000540537 TRPC5OSA6NMA1 111 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 HDAC3O15379 428 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 CSTAP01040 98 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 KLK2P20151 261 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 CHI3L1P36222 383 aaPredicted RBP18.71■□□□□ 0.59
CHFR-217ENST00000540537 ATG16L1Q676U5 607 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 STAC2Q6ZMT1 411 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 EIF3MQ7L2H7 374 aaKnown RBP18.71■□□□□ 0.59
CHFR-217ENST00000540537 OLIG3Q7RTU3 272 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 ABHD3Q8WU67 409 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 PIK3IP1Q96FE7 263 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 ZC3HAV1LQ96H79 300 aaKnown RBP18.71■□□□□ 0.59
CHFR-217ENST00000540537 TEX37Q96LM6 180 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 THUMPD3Q9BV44 507 aaKnown RBP18.71■□□□□ 0.59
CHFR-217ENST00000540537 SAP130Q9H0E3 1048 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 MARCOQ9UEW3 520 aaPredicted RBP18.71■□□□□ 0.59
CHFR-217ENST00000540537 WDR45Q9Y484 360 aa18.71■□□□□ 0.59
CHFR-217ENST00000540537 FLNAP21333 2647 aaKnown RBP18.7■□□□□ 0.58
CHFR-217ENST00000540537 CYP7B1O75881 506 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 SLC7A1P30825 629 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 NME5P56597 212 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 UFM1P61960 85 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 LRRC74AQ0VAA2 488 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 FUT5Q11128 374 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 TMEM201Q5SNT2 666 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 ANKRD34AQ69YU3 496 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 TYW3Q6IPR3 259 aaKnown RBP18.7■□□□□ 0.58
CHFR-217ENST00000540537 C3orf33Q6P1S2 294 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 C22orf34Q6ZV56 151 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 FCRLAQ7L513 359 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 SLC43A2Q8N370 569 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 FAM71CQ8NEG0 241 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 ATP6V1C2Q8NEY4 427 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 MGARPQ8TDB4 240 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 RAB8BQ92930 207 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 ROPN1LQ96C74 230 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 OR10A4Q9H209 315 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 KLHL13Q9P2N7 655 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 SLC35A3Q9Y2D2 325 aa18.7■□□□□ 0.58
CHFR-217ENST00000540537 FREM1Q5H8C1 2179 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 SLCO1B7G3V0H7 640 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 ERLIN1O75477 346 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 UBTFL6P0CB48 400 aaPredicted RBP18.69■□□□□ 0.58
CHFR-217ENST00000540537 PGCP20142 388 aa18.69■□□□□ 0.58
CHFR-217ENST00000540537 EPHA3P29320 983 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms