RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ING5Q8WYH8 240 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 LINGO1Q96FE5 620 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 OR1F2PQ96R84 312 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 CDCA3Q99618 268 aaPredicted RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 EGLN1Q9GZT9 426 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 MFFQ9GZY8 342 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 KLHL1Q9NR64 748 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 DZANK1Q9NVP4 752 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 RHCGQ9UBD6 479 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 CXorf65A6NEN9 183 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 H3BN98 237 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 TLX2O43763 284 aaPredicted RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 SC5DO75845 299 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CPSF4O95639 269 aaKnown RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 LATS1O95835 1130 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 EBLN1P0CF75 366 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CELP19835 753 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 AGAP20933 346 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 IDSP22304 550 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 MMP15P51511 669 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 HMGA2P52926 109 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 GAS1P54826 345 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 DYRK1AQ13627 763 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 XKR6Q5GH73 641 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 C18orf63Q68DL7 685 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 ZNF770Q6IQ21 691 aaPredicted RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 PRICKLE2Q7Z3G6 844 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 NAGSQ8N159 534 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CARFQ8N187 725 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 ZNF561Q8N587 486 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CELF5Q8N6W0 485 aaKnown RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 RTL3Q8N8U3 475 aaKnown RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 ACOT11Q8WXI4 607 aaPredicted RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 IGSF8Q969P0 613 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 RNFT2Q96EX2 444 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 MISP3Q96FF7 219 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 C2orf88Q9BSF0 95 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 FAIM2Q9BWQ8 316 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 JAM3Q9BX67 310 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 FAM117AQ9C073 453 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 TGIF2Q9GZN2 237 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 XKR8Q9H6D3 395 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CTPS2Q9NRF8 586 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 THSD1Q9NS62 852 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 SEMA3GQ9NS98 782 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 LAMP5Q9UJQ1 280 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 FBXL3Q9UKT7 428 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 FZD4Q9ULV1 537 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CCL26Q9Y258 94 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 RASD1Q9Y272 281 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 MRPS23Q9Y3D9 190 aaKnown RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 MTCL1Q9Y4B5 1905 aaKnown RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 BTBD17A6NE02 478 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CACNB4O00305 520 aaPredicted RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 SOX1O00570 391 aaPredicted RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 OR2T1O43869 369 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CREBL2O60519 120 aaPredicted RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 IFNGP01579 166 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 NR2C1P13056 603 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 UQCRC2P22695 453 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 VAMP1P23763 118 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 MAPK3P27361 379 aaPredicted RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 BDKRB2P30411 391 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CD86P42081 329 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 KIR3DL1P43629 444 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 PPIAP62937 165 aaKnown RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 SLC7A9P82251 487 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 DLX2Q07687 328 aaPredicted RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 SF1Q15637 639 aaKnown RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 SYT14P1Q58G82 188 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 PYY3Q5JQD4 70 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 UNQ6494/PRO21346Q6UXR6 183 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 TPRA1Q86W33 373 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 ZNF683Q8IZ20 524 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CMTM8Q8IZV2 173 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 SIDT2Q8NBJ9 832 aaKnown RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 OR13C4Q8NGS5 318 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 OR4L1Q8NH43 312 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 RGMAQ96B86 450 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 PLD4Q96BZ4 506 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 RSRP1Q9BUV0 290 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 SLC39A8Q9C0K1 460 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 TOLLIPQ9H0E2 274 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 SFXN1Q9H9B4 322 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 TPT1P8Q9HAU6 139 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 CACYBPQ9HB71 228 aaKnown RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 TVP23BQ9NYZ1 205 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 GDE1Q9NZC3 331 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 NUDT4Q9NZJ9 180 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 MRPL15Q9P015 296 aaKnown RBP8.82□□□□□ -1
CTNNA1-243ENST00000540387 CLEC4AQ9UMR7 237 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 ARL5AQ9Y689 179 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 PRUNE2Q8WUY3 3088 aa8.82□□□□□ -1
CTNNA1-243ENST00000540387 OR6C76A6NM76 312 aa8.81□□□□□ -1
CTNNA1-243ENST00000540387 ANHXE9PGG2 379 aa8.81□□□□□ -1
CTNNA1-243ENST00000540387 KHDRBS3O75525 346 aaKnown RBP8.81□□□□□ -1
CTNNA1-243ENST00000540387 NFATC1O95644 943 aa8.81□□□□□ -1
CTNNA1-243ENST00000540387 OR12D1P0DN82 309 aa8.81□□□□□ -1
CTNNA1-243ENST00000540387 MGMTP16455 207 aa8.81□□□□□ -1
CTNNA1-243ENST00000540387 CEBPBP17676 345 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms