RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PRKCAP17252 672 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 PGCP20142 388 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 PRKAR1BP31321 381 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 GSK3BP49841 420 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 LHX2P50458 406 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 EEFSECP57772 596 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 DMTNQ08495 405 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 EPS8Q12929 822 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 VEZF1Q14119 521 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 INTS11Q5TA45 600 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 ZNF585AQ6P3V2 769 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 DHRS4L2Q6PKH6 230 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 ENPP6Q6UWR7 440 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 C3P1Q6ZMU1 363 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 CCDC80Q76M96 950 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 PATL1Q86TB9 770 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 COMTD1Q86VU5 262 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 ARMC8Q8IUR7 673 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 GRAMD2AQ8IUY3 354 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 PGAM4Q8N0Y7 254 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 GTPBP8Q8N3Z3 284 aaPredicted RBP11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 SMYD1Q8NB12 490 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 ZNF563Q8TA94 476 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 ZBTB8AQ96BR9 441 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 RNF145Q96MT1 663 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 ALKBH4Q9NXW9 302 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 ADA2Q9NZK5 511 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 TMEM181Q9P2C4 612 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 PACSIN3Q9UKS6 424 aa11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 HELZ2Q9BYK8 2649 aaKnown RBP11.49□□□□□ -0.57
TSPAN9-207ENST00000539631 KIAA1549Q9HCM3 1950 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 ESPL1Q14674 2120 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 C7orf72A4D263 438 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 CCL21O00585 134 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 LRRTM2O43300 516 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 FRS3O43559 492 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 EFNA2O43921 213 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 UBOX5O94941 541 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 PEPDP12955 493 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 PRG2P13727 222 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 POU3F2P20265 443 aaPredicted RBP11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 IL11P20809 199 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 CALB2P22676 271 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 PSMA4P25789 261 aaKnown RBP11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 SLC6A8P48029 635 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 IDH2P48735 452 aaKnown RBP11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 MNAT1P51948 309 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 CRYBA2P53672 197 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 CASP6P55212 293 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 SESN3P58005 492 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 SRYQ05066 204 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 ZSWIM7Q19AV6 140 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 SLC25A53Q5H9E4 307 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 C16orf89Q6UX73 402 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 RINLQ6ZS11 566 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 ZNF550Q7Z398 422 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 FJX1Q86VR8 437 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 ZNF440Q8IYI8 595 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 RNF148Q8N7C7 305 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 GPR32P1Q8NGA4 272 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 SLC26A7Q8TE54 656 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 SMPDL3BQ92485 455 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 RELTQ969Z4 430 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 TAMM41Q96BW9 452 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 PINK1Q9BXM7 581 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 PRDM14Q9GZV8 571 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 ALG2Q9H553 416 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 ARMC7Q9H6L4 198 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 SPAG4Q9NPE6 437 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 PHF3Q92576 2039 aaKnown RBP11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 SPTA1P02549 2419 aa11.48□□□□□ -0.57
TSPAN9-207ENST00000539631 PRRC2CQ9Y520 2896 aaKnown RBP11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 MED12Q93074 2177 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 A0A1B0GUH1 482 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 PRORSD1PA6NEY8 169 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 CFAP73A6NFT4 308 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 LINC01387J3KSC0 135 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 ETV2O00321 342 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 SEMA7AO75326 666 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 NTN1O95631 604 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 OPN1LWP04000 364 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 GP1BBP13224 206 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 CPN1P15169 458 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 ZNF708P17019 499 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 CD247P20963 164 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 CPOXP36551 454 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 EIF1P41567 113 aaKnown RBP11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 ACAA2P42765 397 aaKnown RBP11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 SUCLG1P53597 346 aaKnown RBP11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 CLDN18P56856 261 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 HOXC5Q00444 222 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 KCNC4Q03721 635 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 SRSF1Q07955 248 aaKnown RBP eCLIP11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 BCL2A1Q16548 175 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 DUSP7Q16829 419 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 RTL6Q6ICC9 239 aa11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 NCCRP1Q6ZVX7 275 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-207ENST00000539631 PLEKHM3Q6ZWE6 761 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms