RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 MAPK14Q16539 360 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 PHF19Q5T6S3 580 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 ASB15Q8WXK1 588 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 HOXB13Q92826 284 aaPredicted RBP15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 GFM1Q96RP9 751 aaKnown RBP15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 PNO1Q9NRX1 252 aaKnown RBP15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 SATB2Q9UPW6 733 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 ARRDC5A6NEK1 342 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 A8MUA0 341 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 C17orf105B2RV13 164 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 KHNYNO15037 678 aaKnown RBP15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 TPST2O60704 377 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 ENTPD6O75354 484 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 STX11O75558 287 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 RFX3P48380 749 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 RNF144AP50876 292 aaPredicted RBP15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 FOXL2P58012 376 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 POU6F2P78424 691 aaPredicted RBP15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 RHAGQ02094 409 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZMAT1Q5H9K5 638 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 ARMC4Q5T2S8 1044 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 YOD1Q5VVQ6 348 aaPredicted RBP15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 SIGIRRQ6IA17 410 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZAR1Q86SH2 424 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 TAGAPQ8N103 731 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 SUN5Q8TC36 379 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 PTPMT1Q8WUK0 201 aaPredicted RBP15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 ST6GAL2Q96JF0 529 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 VSTM2LQ96N03 204 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 IL4I1Q96RQ9 567 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 TTYH2Q9BSA4 534 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 SLC7A5P2Q9GIP4 190 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 SLC25A19Q9HC21 320 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 KCNE5Q9UJ90 142 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 ACAD8Q9UKU7 415 aa15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 LSM2Q9Y333 95 aaKnown RBP15.78■□□□□ 0.12
PCDHB17P-201ENST00000539533 PEX12O00623 359 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 PRKAR1BP31321 381 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 DUSP3P51452 185 aaPredicted RBP15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 HOXC5Q00444 222 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 GALK2Q01415 458 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 FUT7Q11130 342 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZNF770Q6IQ21 691 aaPredicted RBP15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 PWWP2BQ6NUJ5 590 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 TMPRSS11AQ6ZMR5 421 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 MED25Q71SY5 747 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 RAB43Q86YS6 212 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 PEX5LQ8IYB4 626 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 C16orf52Q8NHV5 167 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 MED30Q96HR3 178 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 LMF2Q9BU23 707 aaKnown RBP15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 OR10A5Q9H207 317 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 C11orf16Q9NQ32 467 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 SLC22A11Q9NSA0 550 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 OCIAD1Q9NX40 245 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 PAQR5Q9NXK6 330 aaPredicted RBP15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZNF443Q9Y2A4 671 aaPredicted RBP15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 MMACHCQ9Y4U1 282 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 CFAP54Q96N23 3096 aa15.77■□□□□ 0.12
PCDHB17P-201ENST00000539533 SYT5O00445 386 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 GDF9O60383 454 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 H1F0P07305 194 aaKnown RBP15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 ENDOUP21128 410 aaKnown RBP15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 CSTF2P33240 577 aaKnown RBP eCLIP15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 DDOSTP39656 456 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 SEC23BQ15437 767 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 NNATQ16517 81 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 RHBDD2Q6NTF9 364 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 QSOX2Q6ZRP7 698 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 SLITRK4Q8IW52 837 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 TMEM151BQ8IW70 566 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 LAX1Q8IWV1 398 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF619Q8N2I2 560 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF321PQ8N8H1 164 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF615Q8N8J6 731 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 ARHGDIGQ99819 225 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 SAP130Q9H0E3 1048 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 APMAPQ9HDC9 416 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 CTSFQ9UBX1 484 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 CLEC2DQ9UHP7 191 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 SLC13A4Q9UKG4 626 aa15.77■□□□□ 0.11
PCDHB17P-201ENST00000539533 IGKV3D-11A0A0A0MRZ8 115 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 FAM86C2PA6NEL3 165 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 PRKNO60260 465 aaPredicted RBP15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 PRAMEF2O60811 474 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 CRYZL1O95825 349 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 CLPSP04118 112 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 ELAVL4P26378 380 aaKnown RBP15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 RORCP51449 518 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNHIT3Q15649 155 aaPredicted RBP15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF79Q15937 498 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 BAK1Q16611 211 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 NPSR1Q6W5P4 371 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF836Q6ZNA1 936 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 GDPGP1Q6ZNW5 385 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 SENP5Q96HI0 755 aaPredicted RBP15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 IRF2BPLQ9H1B7 796 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 SNTG1Q9NSN8 517 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 RARRES3Q9UL19 164 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 SRPK3Q9UPE1 567 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms