RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 CT45A2Q5DJT8 189 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 OLFML2AQ68BL7 652 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 SPATC1Q76KD6 591 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 LRRC70Q7Z2Q7 622 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 PAGE2Q7Z2X7 111 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 NAT8LQ8N9F0 302 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 HUS1BQ8NHY5 278 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 FAM110DQ8TAY7 271 aaPredicted RBP7.97□□□□□ -1.13
USP28-205ENST00000537706 BBS4Q96RK4 519 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 CITED1Q99966 193 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 MCMBPQ9BTE3 642 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 TMPRSS13Q9BYE2 586 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 PLAC1Q9HBJ0 212 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 ASB6Q9NWX5 421 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 AHSPQ9NZD4 102 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 PCDHGA11Q9Y5H2 935 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 PRR14LQ5THK1 2151 aa7.97□□□□□ -1.13
USP28-205ENST00000537706 C1orf226A1L170 272 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 ZNF724A8MTY0 619 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 hCG_2039718K7EN88 272 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 PRAMEF4O60810 478 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 MPZL1O95297 269 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 CLDN9O95484 217 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 ANGPTL1O95841 491 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 AVPP01185 164 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 CRYAAP02489 173 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 ZNF37AP17032 561 aaPredicted RBP7.96□□□□□ -1.13
USP28-205ENST00000537706 ELK4P28324 431 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 EIF1P41567 113 aaKnown RBP7.96□□□□□ -1.13
USP28-205ENST00000537706 CCT5P48643 541 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 CORO7P57737 925 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 GPX6P59796 221 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 PRPS1P60891 318 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 TGFBR3Q03167 851 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 ZNF155Q12901 538 aaPredicted RBP7.96□□□□□ -1.13
USP28-205ENST00000537706 CSTF3Q12996 717 aaKnown RBP7.96□□□□□ -1.13
USP28-205ENST00000537706 CUL3Q13618 768 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 HLXQ14774 488 aaPredicted RBP7.96□□□□□ -1.13
USP28-205ENST00000537706 TGFBIQ15582 683 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 CYP27C1Q4G0S4 372 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 PRAMEF9Q5VWM5 478 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 RUSC1-AS1Q66K80 236 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 GRHL2Q6ISB3 625 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 VHLLQ6RSH7 139 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 GALNT7Q86SF2 657 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 MYLK4Q86YV6 388 aaPredicted RBP7.96□□□□□ -1.13
USP28-205ENST00000537706 KIR3DL3Q8N743 410 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 OR4F15Q8NGB8 312 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 RNF217Q8TC41 542 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 KLHL29Q96CT2 875 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 MTERF1Q99551 399 aaKnown RBP7.96□□□□□ -1.13
USP28-205ENST00000537706 TMEM79Q9BSE2 394 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 ZNF717Q9BY31 904 aaPredicted RBP7.96□□□□□ -1.13
USP28-205ENST00000537706 SRXN1Q9BYN0 137 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 CCDC134Q9H6E4 229 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 C7orf69Q9H7B7 122 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 CD274Q9NZQ7 290 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 ACTL7BQ9Y614 415 aa7.96□□□□□ -1.13
USP28-205ENST00000537706 EXOC1LA0A1B0GW35 172 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 EBAG9O00559 213 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 AHSGP02765 367 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 CHN1P15882 459 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 ACHEP22303 614 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 TMEM33P57088 247 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 PDIA2Q13087 525 aaKnown RBP7.95□□□□□ -1.14
USP28-205ENST00000537706 FASTKD3Q14CZ7 662 aaKnown RBP7.95□□□□□ -1.14
USP28-205ENST00000537706 RASA2Q15283 850 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 ADIPOQQ15848 244 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 SLC9B1Q4ZJI4 515 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 ARMCX4Q5H9R4 360 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 SLC48A1Q6P1K1 146 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 GALNT18Q6P9A2 607 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 ZBED8Q8IZ13 594 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 PPP1R14AQ96A00 147 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 APH1AQ96BI3 265 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 MUS81Q96NY9 551 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 PSD2Q9BQI7 771 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 SLC30A2Q9BRI3 323 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 CXorf36Q9H7Y0 433 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 TAS2R9Q9NYW1 312 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 SENP1Q9P0U3 644 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 ZDHHC2Q9UIJ5 367 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 TSC22D4Q9Y3Q8 395 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 A0A1W2PRB8 838 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 GMNCA6NCL1 334 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 PIP5K1BO14986 540 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 TAPBPO15533 448 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 PPIHO43447 177 aaKnown RBP7.95□□□□□ -1.14
USP28-205ENST00000537706 COQ9O75208 318 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 ENPP1P22413 925 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 OMGP23515 440 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 SLC7A1P30825 629 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 PHBP35232 272 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 MAGEA6P43360 314 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 MTNR1AP48039 350 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 GABRA6Q16445 453 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 C2orf68Q2NKX9 166 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 CCNYL2Q5T2Q4 361 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 ASPHD2Q6ICH7 369 aa7.95□□□□□ -1.14
USP28-205ENST00000537706 C16orf87Q6PH81 154 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms