RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 WASH3PC4AMC7 463 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 M0R3H8 397 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 DCNP07585 359 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 FAM157BP0CG42 384 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TIA1P31483 386 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 BMP8BP34820 402 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 RBMXP38159 391 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 SSBP1Q04837 148 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 RELQ04864 619 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 PIN1Q13526 163 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 C21orf62-AS1Q17RA5 79 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TIGD5Q53EQ6 642 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TCEAL5Q5H9L2 206 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 IER5LQ5T953 404 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 FAM46CQ5VWP2 391 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 APOOLQ6UXV4 268 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 BMP8AQ7Z5Y6 402 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 OR6K3Q8NGY3 331 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ALG8Q9BVK2 526 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TEX101Q9BY14 249 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM38AQ9H6F2 299 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM248Q9NWD8 314 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 BABAM2Q9NXR7 383 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 CPNE7Q9UBL6 633 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TAC3Q9UHF0 121 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 WDR45Q9Y484 360 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 CIB4A0PJX0 185 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 AGAP14A8MT82 685 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF705FA8MVS1 300 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ANKRD66B4E2M5 251 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 GPR89AB7ZAQ6 455 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 EDN1P05305 212 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 GPR89BP0CG08 455 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF705DP0CH99 300 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF705BP0CI00 300 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 SNRPBP14678 240 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF20P17024 532 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 SDC1P18827 310 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 POU3F3P20264 500 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 MMP15P51511 669 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 POU4F2Q12837 409 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 SERINC3Q13530 473 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM205Q6UW68 189 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 HTR3DQ70Z44 454 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM179BQ7Z7N9 219 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 MFSD6LQ8IWD5 586 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF101Q8IZC7 436 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ACBD7Q8N6N7 88 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 SYNPRQ8TBG9 265 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 CPNE4Q96A23 557 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 NIPSNAP1Q9BPW8 284 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 WRAP53Q9BUR4 548 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 POTEKPQ9BYX7 375 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 PLEKHA1Q9HB21 404 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 ZFP57Q9NU63 452 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 C14orf166Q9Y224 244 aaKnown RBP5.07□□□□□ -1.6
PTPRD-213ENST00000537002 KCNMB2Q9Y691 235 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 POMT1Q9Y6A1 747 aa5.07□□□□□ -1.6
PTPRD-213ENST00000537002 A0A0G2JLL6 359 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ARL5CA6NH57 179 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 GSTZ1O43708 216 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 GASTP01350 101 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 IGHA2P01877 340 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 PET100P0DJ07 73 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 HAPLN1P10915 354 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ADH6P28332 368 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 SLC6A6P31641 620 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 GRK6P43250 576 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ZFP36L2P47974 494 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 LUMP51884 338 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 EPHA5P54756 1037 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 KCNAB1Q14722 419 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 MINDY4Q4G0A6 757 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 LRFN4Q6PJG9 635 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 PRRT2Q7Z6L0 340 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 PARGQ86W56 976 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 NRMQ8IXM6 262 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 PPTC7Q8NI37 304 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 BRIX1Q8TDN6 353 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 DUSP19Q8WTR2 217 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 C20orf85Q9H1P6 137 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 DLL4Q9NR61 685 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 VNN3Q9NY84 501 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 NLGN3Q9NZ94 848 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 PLEKHB1Q9UF11 243 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 RBM7Q9Y580 266 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 C2orf78A6NCI8 922 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF729A6NN14 1252 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ATG12O94817 140 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ATP1B2P14415 290 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 MGMTP16455 207 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 GDNFP39905 211 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 HCCSP53701 268 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 LASP1Q14847 261 aaKnown RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 NFATC4Q14934 902 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ETFDHQ16134 617 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 CPOQ8IVL8 374 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 OR51A7Q8NH64 312 aa5.06□□□□□ -1.6
PTPRD-213ENST00000537002 ACOT11Q8WXI4 607 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-213ENST00000537002 DDX31Q9H8H2 851 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms