RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 AGO4Q9HCK5 861 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 MRPS30Q9NP92 439 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 EIF2B3Q9NR50 452 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 KLHL1Q9NR64 748 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CLN6Q9NWW5 311 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GFOD1Q9NXC2 390 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 KLK11Q9UBX7 282 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 PHF11Q9UIL8 331 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 PLEKHA6Q9Y2H5 1048 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 DOCK5Q9H7D0 1870 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 LAMA2P24043 3122 aaKnown RBP3.46□□□□□ -1.85
MCF2-210ENST00000536274 LOC102724200A0A096LPH7 203 aaPredicted RBP3.46□□□□□ -1.85
MCF2-210ENST00000536274 ZNF726A6NNF4 738 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 B4E171 279 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 J3QW42 95 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 PSMD9O00233 223 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 CCSO14618 274 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 MDM4O15151 490 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 CHST10O43529 356 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 PAPLNO95428 1278 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 SOD1P00441 154 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 IGHV2-5P01817 119 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 FGBP02675 491 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 IDSP22304 550 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 EDNRBP24530 442 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 OPRD1P41143 372 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 CD200P41217 278 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 DCDP81605 110 aaKnown RBP3.46□□□□□ -1.85
MCF2-210ENST00000536274 ABHD18Q0P651 414 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 SNTB2Q13425 540 aaKnown RBP3.46□□□□□ -1.85
MCF2-210ENST00000536274 DYRK1AQ13627 763 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 ACTBL2Q562R1 376 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 C9orf50Q5SZB4 431 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 EEF1DP3Q658K8 133 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 ACSM5Q6NUN0 579 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 C5orf24Q7Z6I8 188 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 UNC93AQ86WB7 457 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 TMEM17Q86X19 198 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 ZNF280BQ86YH2 543 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 TRAPPC5Q8IUR0 188 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 OR8J3Q8NGG0 315 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 OR52I1Q8NGK6 324 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 OR4A4PQ8NGN8 299 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 OR13C5Q8NGS8 318 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 SLC25A43Q8WUT9 341 aaPredicted RBP3.46□□□□□ -1.85
MCF2-210ENST00000536274 ATG4CQ96DT6 458 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 MED8Q96G25 268 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 SCARF2Q96GP6 870 aaPredicted RBP3.46□□□□□ -1.85
MCF2-210ENST00000536274 ZNF354BQ96LW1 612 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 OR4K3Q96R72 315 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 ATOH8Q96SQ7 321 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 TBL1YQ9BQ87 522 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 FDXACB1Q9BRP7 624 aaPredicted RBP3.46□□□□□ -1.85
MCF2-210ENST00000536274 MENTQ9BUN1 341 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 ALG8Q9BVK2 526 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 ST6GALNAC4Q9H4F1 302 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 SERHLQ9NQF3 203 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 MED9Q9NWA0 146 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 ZIM2Q9NZV7 527 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 NEU3Q9UQ49 428 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 SF3B6Q9Y3B4 125 aaKnown RBP3.46□□□□□ -1.85
MCF2-210ENST00000536274 NUBP2Q9Y5Y2 271 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 MTCH2Q9Y6C9 303 aa3.46□□□□□ -1.85
MCF2-210ENST00000536274 MEIS3P1A6NDR6 274 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 M0QYT0 321 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 TLR4O00206 839 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 GABRPO00591 440 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 YY2O15391 372 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 TOX3O15405 576 aaPredicted RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 MED7O43513 233 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 TCF21O43680 179 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PRKYO43930 277 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 MOSPD3O75425 235 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 SOX30O94993 753 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 KCNK5O95279 499 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CH25HO95992 272 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 HIST1H2ABP04908 130 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 UBCP0CG48 685 aaKnown RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 ACKR3P25106 362 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PSMA3P25788 255 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CD1CP29017 333 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 HOXC8P31273 242 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 TLX1P31314 330 aaPredicted RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 AKT1P31749 480 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 AHRP35869 848 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PPIAP62937 165 aaKnown RBP3.46□□□□□ -1.86
MCF2-210ENST00000536274 ITKQ08881 620 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 DOC2AQ14183 400 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 ZNF235Q14590 738 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 IHHQ14623 411 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 DHCR24Q15392 516 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 SLC14A2Q15849 920 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 SV2CQ496J9 727 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 THEM4Q5T1C6 240 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 CNKSR3Q6P9H4 555 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 BAIAP2L2Q6UXY1 529 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 HIST3H2AQ7L7L0 130 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 FAM122BQ7Z309 247 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 PTOV1Q86YD1 416 aa3.46□□□□□ -1.86
MCF2-210ENST00000536274 THNSL2Q86YJ6 484 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms