RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 TPD52L1Q16890 204 aaPredicted RBP2.54□□□□□ -2
VBP1-203ENST00000535916 CCDC57Q2TAC2 916 aa2.54□□□□□ -2
VBP1-203ENST00000535916 SBK1Q52WX2 424 aa2.54□□□□□ -2
VBP1-203ENST00000535916 TAF3Q5VWG9 929 aa2.54□□□□□ -2
VBP1-203ENST00000535916 RHBDD2Q6NTF9 364 aa2.54□□□□□ -2
VBP1-203ENST00000535916 DPY19L2P2Q6ZN68 376 aa2.54□□□□□ -2
VBP1-203ENST00000535916 CENPUQ71F23 418 aa2.54□□□□□ -2
VBP1-203ENST00000535916 MOB1BQ7L9L4 216 aa2.54□□□□□ -2
VBP1-203ENST00000535916 TTC5Q8N0Z6 440 aa2.54□□□□□ -2
VBP1-203ENST00000535916 LRRC75A-AS1Q8N1F1 130 aa2.54□□□□□ -2
VBP1-203ENST00000535916 ARFGAP2Q8N6H7 521 aa2.54□□□□□ -2
VBP1-203ENST00000535916 ANKFN1Q8N957 763 aa2.54□□□□□ -2
VBP1-203ENST00000535916 AKR7LQ8NHP1 331 aa2.54□□□□□ -2
VBP1-203ENST00000535916 WDR36Q8NI36 951 aaKnown RBP2.54□□□□□ -2
VBP1-203ENST00000535916 PNPT1Q8TCS8 783 aaKnown RBP2.54□□□□□ -2
VBP1-203ENST00000535916 AGR3Q8TD06 166 aa2.54□□□□□ -2
VBP1-203ENST00000535916 SPRYD4Q8WW59 207 aaPredicted RBP2.54□□□□□ -2
VBP1-203ENST00000535916 CAPNS2Q96L46 248 aa2.54□□□□□ -2
VBP1-203ENST00000535916 CFAP53Q96M91 514 aa2.54□□□□□ -2
VBP1-203ENST00000535916 C9orf85Q96MD7 179 aa2.54□□□□□ -2
VBP1-203ENST00000535916 NPY6RQ99463 290 aa2.54□□□□□ -2
VBP1-203ENST00000535916 NLNQ9BYT8 704 aa2.54□□□□□ -2
VBP1-203ENST00000535916 METTL7AQ9H8H3 244 aa2.54□□□□□ -2
VBP1-203ENST00000535916 LPAR2Q9HBW0 351 aa2.54□□□□□ -2
VBP1-203ENST00000535916 GDAP2Q9NXN4 497 aa2.54□□□□□ -2
VBP1-203ENST00000535916 RNF14Q9UBS8 474 aa2.54□□□□□ -2
VBP1-203ENST00000535916 ZNF221Q9UK13 617 aa2.54□□□□□ -2
VBP1-203ENST00000535916 OR10H1Q9Y4A9 318 aa2.54□□□□□ -2
VBP1-203ENST00000535916 GAKO14976 1311 aa2.53□□□□□ -2
VBP1-203ENST00000535916 TRAV26-1A0A087WT03 109 aa2.53□□□□□ -2
VBP1-203ENST00000535916 FAM47DPA6NHR8 397 aa2.53□□□□□ -2
VBP1-203ENST00000535916 LRRIQ4A6NIV6 560 aa2.53□□□□□ -2
VBP1-203ENST00000535916 FAM25EA8MYX2 175 aa2.53□□□□□ -2
VBP1-203ENST00000535916 H0YC42 278 aa2.53□□□□□ -2
VBP1-203ENST00000535916 H3BTX0 84 aa2.53□□□□□ -2
VBP1-203ENST00000535916 SLC17A2O00624 439 aa2.53□□□□□ -2
VBP1-203ENST00000535916 DNALI1O14645 258 aaPredicted RBP2.53□□□□□ -2
VBP1-203ENST00000535916 ARPC3O15145 178 aa2.53□□□□□ -2
VBP1-203ENST00000535916 MED7O43513 233 aa2.53□□□□□ -2
VBP1-203ENST00000535916 BUB1O43683 1085 aa2.53□□□□□ -2
VBP1-203ENST00000535916 TM7SF2O76062 418 aa2.53□□□□□ -2
VBP1-203ENST00000535916 CSF2P04141 144 aa2.53□□□□□ -2
VBP1-203ENST00000535916 WNT2P09544 360 aa2.53□□□□□ -2
VBP1-203ENST00000535916 UQCRC2P22695 453 aa2.53□□□□□ -2
VBP1-203ENST00000535916 RFC4P35249 363 aa2.53□□□□□ -2
VBP1-203ENST00000535916 GRIA1P42261 906 aa2.53□□□□□ -2
VBP1-203ENST00000535916 CAV2P51636 162 aa2.53□□□□□ -2
VBP1-203ENST00000535916 SGSHP51688 502 aa2.53□□□□□ -2
VBP1-203ENST00000535916 NAPAP54920 295 aa2.53□□□□□ -2
VBP1-203ENST00000535916 RPL23AP62750 156 aaKnown RBP2.53□□□□□ -2
VBP1-203ENST00000535916 HERVK_113P63132 956 aa2.53□□□□□ -2
VBP1-203ENST00000535916 ERVK-8P63133 956 aa2.53□□□□□ -2
VBP1-203ENST00000535916 NUCB2P80303 420 aa2.53□□□□□ -2
VBP1-203ENST00000535916 PJVKQ0ZLH3 352 aa2.53□□□□□ -2
VBP1-203ENST00000535916 IFT88Q13099 833 aa2.53□□□□□ -2
VBP1-203ENST00000535916 EXOC3L2Q2M3D2 409 aa2.53□□□□□ -2
VBP1-203ENST00000535916 GLYR1Q49A26 553 aaPredicted RBP2.53□□□□□ -2
VBP1-203ENST00000535916 CAVIN4Q5BKX8 364 aa2.53□□□□□ -2
VBP1-203ENST00000535916 TTC23Q5W5X9 447 aa2.53□□□□□ -2
VBP1-203ENST00000535916 SYT10Q6XYQ8 523 aa2.53□□□□□ -2
VBP1-203ENST00000535916 ADAMTSL5Q6ZMM2 481 aa2.53□□□□□ -2
VBP1-203ENST00000535916 VSTM4Q8IW00 320 aa2.53□□□□□ -2
VBP1-203ENST00000535916 ZNF683Q8IZ20 524 aa2.53□□□□□ -2
VBP1-203ENST00000535916 OR52J3Q8NH60 311 aa2.53□□□□□ -2
VBP1-203ENST00000535916 TRMT10AQ8TBZ6 339 aaKnown RBP2.53□□□□□ -2
VBP1-203ENST00000535916 RAET1EQ8TD07 263 aa2.53□□□□□ -2
VBP1-203ENST00000535916 ADAMTS16Q8TE57 1224 aa2.53□□□□□ -2
VBP1-203ENST00000535916 GIMAP1Q8WWP7 306 aa2.53□□□□□ -2
VBP1-203ENST00000535916 COQ2Q96H96 371 aa2.53□□□□□ -2
VBP1-203ENST00000535916 PLIN2Q99541 437 aa2.53□□□□□ -2
VBP1-203ENST00000535916 TMEM43Q9BTV4 400 aa2.53□□□□□ -2
VBP1-203ENST00000535916 ERVK-6Q9BXR3 956 aa2.53□□□□□ -2
VBP1-203ENST00000535916 PKIBQ9C010 78 aa2.53□□□□□ -2
VBP1-203ENST00000535916 ELOVL4Q9GZR5 314 aa2.53□□□□□ -2
VBP1-203ENST00000535916 MAGT1Q9H0U3 335 aa2.53□□□□□ -2
VBP1-203ENST00000535916 EHD1Q9H4M9 534 aa2.53□□□□□ -2
VBP1-203ENST00000535916 RPAP3Q9H6T3 665 aaPredicted RBP2.53□□□□□ -2
VBP1-203ENST00000535916 KAT8Q9H7Z6 458 aaKnown RBP2.53□□□□□ -2
VBP1-203ENST00000535916 ETNK2Q9NVF9 386 aa2.53□□□□□ -2
VBP1-203ENST00000535916 RAB20Q9NX57 234 aa2.53□□□□□ -2
VBP1-203ENST00000535916 PDE10AQ9Y233 779 aa2.53□□□□□ -2
VBP1-203ENST00000535916 SLCO1B1Q9Y6L6 691 aa2.53□□□□□ -2
VBP1-203ENST00000535916 ARHGAP21Q5T5U3 1957 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 IGKV2D-24A0A075B6R9 120 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 FAM240BA0A1B0GVZ2 78 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 GOLGA8OA6NCC3 632 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 OR52A4PA6NMU1 304 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 GOLGA8NF8WBI6 632 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 H0YL77 283 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 L7N2F9 121 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 CLDN5O00501 218 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 IMPA2O14732 288 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 SH2D1BO14796 132 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 ZSCAN12O43309 604 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 ZNF208O43345 1280 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 TSPAN2O60636 221 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 FCMRO60667 390 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 JAK2O60674 1132 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 SERPINA3P01011 423 aa2.52□□□□□ -2.01
VBP1-203ENST00000535916 FCER2P06734 321 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms