RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ADSSP30520 456 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 NPY2RP49146 381 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 GZMMP51124 257 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 RPL8P62917 257 aaKnown RBP0.07□□□□□ -2.4
COPB1-212ENST00000534771 SPIBQ01892 262 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 TGFBR3Q03167 851 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 CCDC173Q0VFZ6 552 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 ZNF816Q0VGE8 651 aaPredicted RBP0.07□□□□□ -2.4
COPB1-212ENST00000534771 UBE2V2Q15819 145 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 ZNF699Q32M78 642 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 ANKRD20A8PQ5CZ79 823 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 MFSD4BQ5TF39 518 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 IL23RQ5VWK5 629 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 OR8G2PQ6IF36 304 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 PNCKQ6P2M8 343 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 BTNL3Q6UXE8 466 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 ZNF620Q6ZNG0 422 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 BRINP3Q76B58 766 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 ENOSF1Q7L5Y1 443 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 TMEM104Q8NE00 496 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 CNNM3Q8NE01 707 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 CCDC54Q8NEL0 328 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 DTX3LQ8TDB6 740 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 MCOLN3Q8TDD5 553 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 ART4Q93070 314 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 MS4A14Q96JA4 679 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 DNAJC1Q96KC8 554 aaKnown RBP0.07□□□□□ -2.4
COPB1-212ENST00000534771 CNDP2Q96KP4 475 aaKnown RBP0.07□□□□□ -2.4
COPB1-212ENST00000534771 DOK1Q99704 481 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 TSG101Q99816 390 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 DDX50Q9BQ39 737 aaKnown RBP0.07□□□□□ -2.4
COPB1-212ENST00000534771 SLF1Q9BQI6 1058 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 SULT4A1Q9BR01 284 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 CHMP4AQ9BY43 222 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 ALDH8A1Q9H2A2 487 aaPredicted RBP0.07□□□□□ -2.4
COPB1-212ENST00000534771 SLC40A1Q9NP59 571 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 TREM2Q9NZC2 230 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 WRAP73Q9P2S5 460 aaPredicted RBP0.07□□□□□ -2.4
COPB1-212ENST00000534771 GHRLQ9UBU3 117 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 KIF25Q9UIL4 384 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 APPL1Q9UKG1 709 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 MRPS33Q9Y291 106 aaKnown RBP0.07□□□□□ -2.4
COPB1-212ENST00000534771 TMEM14AQ9Y6G1 99 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 FRMPD3Q5JV73 1810 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 SCN2AQ99250 2005 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 RAD54L2Q9Y4B4 1467 aa0.07□□□□□ -2.4
COPB1-212ENST00000534771 SF3B1O75533 1304 aaKnown RBP eCLIP0.07□□□□□ -2.48e-14■■■■■ 28.8
COPB1-212ENST00000534771 NACADO15069 1562 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 FLG2Q5D862 2391 aaPredicted RBP0.06□□□□□ -2.4
COPB1-212ENST00000534771 PTPRTO14522 1441 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 SSPOA2VEC9 5147 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 BUB1O43683 1085 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 CD5LO43866 347 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 CHST1O43916 411 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 SUPT3HO75486 399 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 LALBAP00709 142 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 IGLV2-23P01705 113 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 IGKV1-16P04430 117 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 ALPPP05187 535 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 SLC35G4P0C7Q5 338 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 AKR1B1P15121 316 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 TSPAN8P19075 237 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 SERPINA2P20848 420 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 RFC2P35250 354 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 ASMTP46597 345 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 GNPDA1P46926 289 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 RAD23AP54725 363 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 SELENOTP62341 195 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 HMGCS1Q01581 520 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 CHRNB3Q05901 458 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 STXBP2Q15833 593 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 ZNF789Q5FWF6 425 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 KLF17Q5JT82 389 aaPredicted RBP0.06□□□□□ -2.4
COPB1-212ENST00000534771 SLC10A5Q5PT55 438 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 C1orf94Q6P1W5 598 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 TOM1L2Q6ZVM7 507 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 SLC22A16Q86VW1 577 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 GPBP1Q86WP2 473 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 SNX32Q86XE0 403 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 STHQ8IWL8 128 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 NUP93Q8N1F7 819 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 C15orf56Q8N910 161 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 NHLRC2Q8NBF2 726 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 NEK11Q8NG66 645 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 OR51S1Q8NGJ8 323 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 RNF139Q8WU17 664 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 RTN4IP1Q8WWV3 396 aaPredicted RBP0.06□□□□□ -2.4
COPB1-212ENST00000534771 AP2M1Q96CW1 435 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 PGLYRP4Q96LB8 373 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 DEFB118Q96PH6 123 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 PANX3Q96QZ0 392 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 OR2A5Q96R48 311 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 NUDT16L1Q9BRJ7 211 aaKnown RBP0.06□□□□□ -2.4
COPB1-212ENST00000534771 TM2D3Q9BRN9 247 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 ZNF717Q9BY31 904 aaPredicted RBP0.06□□□□□ -2.4
COPB1-212ENST00000534771 ROGDIQ9GZN7 287 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 PPDPFQ9H3Y8 114 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 FAM124BQ9H5Z6 455 aaPredicted RBP0.06□□□□□ -2.4
COPB1-212ENST00000534771 CLMPQ9H6B4 373 aa0.06□□□□□ -2.4
COPB1-212ENST00000534771 MAGEF1Q9HAY2 307 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms