RNA–Protein interactions for RNA: ENST00000533991.1

RDX-216, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-216ENST00000533991 QPRTQ15274 297 aa13.79□□□□□ -0.2
RDX-216ENST00000533991 SF3B4Q15427 424 aaKnown RBP eCLIP13.79□□□□□ -0.2
RDX-216ENST00000533991 LILRA2Q8N149 483 aa13.79□□□□□ -0.2
RDX-216ENST00000533991 ZNF619Q8N2I2 560 aa13.79□□□□□ -0.2
RDX-216ENST00000533991 MEIOBQ8N635 442 aa13.79□□□□□ -0.2
RDX-216ENST00000533991 LINC01560Q8TB33 94 aa13.79□□□□□ -0.2
RDX-216ENST00000533991 ZBTB8AQ96BR9 441 aa13.79□□□□□ -0.2
RDX-216ENST00000533991 TRNT1Q96Q11 434 aaKnown RBP13.79□□□□□ -0.2
RDX-216ENST00000533991 EXD2Q9NVH0 621 aa13.79□□□□□ -0.2
RDX-216ENST00000533991 CRIM1Q9NZV1 1036 aa13.79□□□□□ -0.2
RDX-216ENST00000533991 CLEC4AQ9UMR7 237 aa13.79□□□□□ -0.2
RDX-216ENST00000533991 HIVEP1P15822 2718 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 AGAP5A6NIR3 686 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 AP3D1O14617 1153 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 UBTFL6P0CB48 400 aaPredicted RBP13.78□□□□□ -0.2
RDX-216ENST00000533991 UBL4AP11441 157 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 UQCRC1P31930 480 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 EIF1AXP47813 144 aaKnown RBP13.78□□□□□ -0.2
RDX-216ENST00000533991 SUMO3P55854 103 aaPredicted RBP13.78□□□□□ -0.2
RDX-216ENST00000533991 KCNJ10P78508 379 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 TMEM176BQ3YBM2 270 aaPredicted RBP13.78□□□□□ -0.2
RDX-216ENST00000533991 GPAT3Q53EU6 434 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 DLEU7Q6UYE1 221 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 LRRC74BQ6ZQY2 392 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 MSANTD1Q6ZTZ1 278 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 GDF7Q7Z4P5 450 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 ZNF527Q8NB42 609 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 OR2V1Q8NHB1 315 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 SLC38A5Q8WUX1 472 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 DYDC1Q8WWB3 177 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 ROBO4Q8WZ75 1007 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 NRGNQ92686 78 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 OSTF1Q92882 214 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 ITCHQ96J02 903 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 SFXN3Q9BWM7 321 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 MCCC2Q9HCC0 563 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 POLE3Q9NRF9 147 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 RLIMQ9NVW2 624 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 CCDC167Q9P0B6 97 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 VAPAQ9P0L0 249 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 DCTN4Q9UJW0 460 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 ING1Q9UK53 422 aaPredicted RBP13.78□□□□□ -0.2
RDX-216ENST00000533991 ZNF175Q9Y473 711 aa13.78□□□□□ -0.2
RDX-216ENST00000533991 ANKRD17O75179 2603 aaKnown RBP13.77□□□□□ -0.2
RDX-216ENST00000533991 A0A1W2PNR3 127 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 POLR3GO15318 223 aaPredicted RBP13.77□□□□□ -0.21
RDX-216ENST00000533991 CYP7B1O75881 506 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 CSTAP01040 98 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 SSTR2P30874 369 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 SFTPDP35247 375 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 PRRC2AP48634 2157 aaKnown RBP13.77□□□□□ -0.21
RDX-216ENST00000533991 ZNF41P51814 821 aaPredicted RBP13.77□□□□□ -0.21
RDX-216ENST00000533991 FAM27E3Q08E93 113 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 SF3A3Q12874 501 aaKnown RBP eCLIP13.77□□□□□ -0.21
RDX-216ENST00000533991 AGKQ53H12 422 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 RPS26P11Q5JNZ5 115 aaPredicted RBP13.77□□□□□ -0.21
RDX-216ENST00000533991 LRIF1Q5T3J3 769 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 ATAD3BQ5T9A4 648 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 ALPK2Q86TB3 2170 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 LUZP2Q86TE4 346 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 RETREG3Q86VR2 466 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 COMTD1Q86VU5 262 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 VRK2Q86Y07 508 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 ZZZ3Q8IYH5 903 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 CLIP4Q8N3C7 705 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 ZNF610Q8N9Z0 462 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 ATP6V1C2Q8NEY4 427 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 STON2Q8WXE9 905 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 SPDL1Q96EA4 605 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 ZFP3Q96NJ6 502 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 OPN3Q9H1Y3 402 aaPredicted RBP13.77□□□□□ -0.21
RDX-216ENST00000533991 MTHFD2LQ9H903 347 aaPredicted RBP13.77□□□□□ -0.21
RDX-216ENST00000533991 NPHS2Q9NP85 383 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 ACER3Q9NUN7 267 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 DNAJB12Q9NXW2 375 aaKnown RBP13.77□□□□□ -0.21
RDX-216ENST00000533991 GALNT8Q9NY28 637 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 DSPPQ9NZW4 1301 aa13.77□□□□□ -0.21
RDX-216ENST00000533991 EEF1E1-BLOC1S5C9J1V9 151 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 H3BNH8 94 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 CLIC1O00299 241 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 EEF1E1O43324 174 aaKnown RBP13.76□□□□□ -0.21
RDX-216ENST00000533991 KRT75O95678 551 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 AGR2O95994 175 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 BMP2P12643 396 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 ADH6P28332 368 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 ATP4BP51164 291 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 SIRPAP78324 504 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 LRRC74AQ0VAA2 488 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 RGNQ15493 299 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 HBMQ6B0K9 141 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 ESPNLQ6ZVH7 1005 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 PLEKHM3Q6ZWE6 761 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 EIF3MQ7L2H7 374 aaKnown RBP13.76□□□□□ -0.21
RDX-216ENST00000533991 ADGRG3Q86Y34 549 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 TRIML2Q8N7C3 387 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 GOLGA6L1Q8N7Z2 621 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 MAL2Q969L2 176 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 KLHL15Q96M94 604 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 CCDC106Q9BWC9 280 aa13.76□□□□□ -0.21
RDX-216ENST00000533991 LIME1Q9H400 295 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms