RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 SMNDC1O75940 238 aaKnown RBP eCLIP19.95■□□□□ 0.78
BEST1-207ENST00000533521 CSTAP01040 98 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 ZCCHC18P0CG32 403 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 KITP10721 976 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 SLC6A8P48029 635 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 MRPL19P49406 292 aaKnown RBP19.95■□□□□ 0.78
BEST1-207ENST00000533521 SELENBP1Q13228 472 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 TYW3Q6IPR3 259 aaKnown RBP19.95■□□□□ 0.78
BEST1-207ENST00000533521 TNFAIP8L2Q6P589 184 aaPredicted RBP19.95■□□□□ 0.78
BEST1-207ENST00000533521 CDC20BQ86Y33 519 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 ZNF614Q8N883 585 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 FBXO27Q8NI29 283 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 TMEM234Q8WY98 164 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 OSTF1Q92882 214 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 ATP6V1G3Q96LB4 118 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 TRNT1Q96Q11 434 aaKnown RBP19.95■□□□□ 0.78
BEST1-207ENST00000533521 MKLN1Q9UL63 735 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 PROCRQ9UNN8 238 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 TESMINQ9Y4I5 508 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 HIVEP1P15822 2718 aa19.95■□□□□ 0.78
BEST1-207ENST00000533521 F8P00451 2351 aa19.94■□□□□ 0.78
BEST1-207ENST00000533521 TNFSF11O14788 317 aa19.94■□□□□ 0.78
BEST1-207ENST00000533521 KRT75O95678 551 aa19.94■□□□□ 0.78
BEST1-207ENST00000533521 CD1EP15812 388 aa19.94■□□□□ 0.78
BEST1-207ENST00000533521 RNPS1Q15287 305 aaKnown RBP19.94■□□□□ 0.78
BEST1-207ENST00000533521 FRRS1Q6ZNA5 592 aa19.94■□□□□ 0.78
BEST1-207ENST00000533521 MAVSQ7Z434 540 aa19.94■□□□□ 0.78
BEST1-207ENST00000533521 ZNF619Q8N2I2 560 aa19.94■□□□□ 0.78
BEST1-207ENST00000533521 FANCFQ9NPI8 374 aa19.94■□□□□ 0.78
BEST1-207ENST00000533521 EXOSC3Q9NQT5 275 aaKnown RBP19.94■□□□□ 0.78
BEST1-207ENST00000533521 ST6GALNAC2Q9UJ37 374 aa19.94■□□□□ 0.78
BEST1-207ENST00000533521 HMGN4O00479 90 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 CASKO14936 926 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 PGCP20142 388 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 FKBP2P26885 142 aaKnown RBP19.93■□□□□ 0.78
BEST1-207ENST00000533521 UGT2B10P36537 528 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 PGM1P36871 562 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 CTBP2P56545 445 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 SIRPAP78324 504 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 FAM27E3Q08E93 113 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 FUT5Q11128 374 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 QPRTQ15274 297 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 TOMM34Q15785 309 aaPredicted RBP19.93■□□□□ 0.78
BEST1-207ENST00000533521 ZNF239Q16600 458 aaKnown RBP19.93■□□□□ 0.78
BEST1-207ENST00000533521 SLC9B1Q4ZJI4 515 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 NXNQ6DKJ4 435 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 EPGNQ6UW88 154 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 CMIPQ8IY22 773 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 SLC43A2Q8N370 569 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 ZNF610Q8N9Z0 462 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 RNF128Q8TEB7 428 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 RAB8BQ92930 207 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 FOXC2Q99958 501 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 VIPAS39Q9H9C1 493 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 ACER3Q9NUN7 267 aa19.93■□□□□ 0.78
BEST1-207ENST00000533521 C16orf97H3BN30 126 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 RFXANKO14593 260 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 UBDO15205 165 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 PLGP00747 810 aaPredicted RBP19.92■□□□□ 0.78
BEST1-207ENST00000533521 HRGP04196 525 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 POU2F1P14859 743 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 CPOXP36551 454 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 NME5P56597 212 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 RAC3P60763 192 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 IRX1P78414 480 aaPredicted RBP19.92■□□□□ 0.78
BEST1-207ENST00000533521 HPCAP84074 193 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 MAPK14Q16539 360 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 NDUFAF6Q330K2 333 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 C3orf33Q6P1S2 294 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 LRRC74BQ6ZQY2 392 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 ZNF621Q6ZSS3 439 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 RNF130Q86XS8 419 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 TMCO5AQ8N6Q1 288 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 ZFP90Q8TF47 636 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 MBD6Q96DN6 1003 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 REXO5Q96IC2 774 aaKnown RBP19.92■□□□□ 0.78
BEST1-207ENST00000533521 TACO1Q9BSH4 297 aaKnown RBP19.92■□□□□ 0.78
BEST1-207ENST00000533521 INPP5KQ9BT40 448 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 THUMPD3Q9BV44 507 aaKnown RBP19.92■□□□□ 0.78
BEST1-207ENST00000533521 OPN3Q9H1Y3 402 aaPredicted RBP19.92■□□□□ 0.78
BEST1-207ENST00000533521 OR10A4Q9H209 315 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 CXXC4Q9H2H0 198 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 TMEM185BQ9H7F4 350 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.92■□□□□ 0.78
BEST1-207ENST00000533521 ZNF226Q9NYT6 803 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 ITGB1BP2Q9UKP3 347 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 USH1CQ9Y6N9 552 aa19.92■□□□□ 0.78
BEST1-207ENST00000533521 PRAMEF27A3QJZ7 478 aa19.91■□□□□ 0.78
BEST1-207ENST00000533521 PPP3CBP16298 524 aa19.91■□□□□ 0.78
BEST1-207ENST00000533521 SFTPDP35247 375 aa19.91■□□□□ 0.78
BEST1-207ENST00000533521 KCNJ10P78508 379 aa19.91■□□□□ 0.78
BEST1-207ENST00000533521 TMEM176BQ3YBM2 270 aaPredicted RBP19.91■□□□□ 0.78
BEST1-207ENST00000533521 SLC25A43Q8WUT9 341 aaPredicted RBP19.91■□□□□ 0.78
BEST1-207ENST00000533521 OR52B2Q96RD2 323 aa19.91■□□□□ 0.78
BEST1-207ENST00000533521 SLC38A1Q9H2H9 487 aa19.91■□□□□ 0.78
BEST1-207ENST00000533521 RMND5AQ9H871 391 aa19.91■□□□□ 0.78
BEST1-207ENST00000533521 MTHFD2LQ9H903 347 aaPredicted RBP19.91■□□□□ 0.78
BEST1-207ENST00000533521 SERINC1Q9NRX5 453 aa19.91■□□□□ 0.78
BEST1-207ENST00000533521 TMEM45AQ9NWC5 275 aa19.91■□□□□ 0.78
BEST1-207ENST00000533521 THUMPD1Q9NXG2 353 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms