RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 RELL2Q8NC24 303 aaPredicted RBP18.4■□□□□ 0.54
CCS-208ENST00000533244 FBXO27Q8NI29 283 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 TMEM19Q96HH6 336 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 MRGPRX4Q96LA9 322 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 TREX2Q9BQ50 279 aaPredicted RBP18.4■□□□□ 0.54
CCS-208ENST00000533244 THUMPD3Q9BV44 507 aaKnown RBP18.4■□□□□ 0.54
CCS-208ENST00000533244 IKZF5Q9H5V7 419 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 NPDC1Q9NQX5 325 aaPredicted RBP18.4■□□□□ 0.54
CCS-208ENST00000533244 SAR1AQ9NR31 198 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 INTS1Q8N201 2190 aaKnown RBP18.4■□□□□ 0.54
CCS-208ENST00000533244 MED12LQ86YW9 2145 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 ADAMDEC1O15204 470 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 EFNA2O43921 213 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 TGM6O95932 706 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 IL18BPO95998 194 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 DBIP07108 87 aaKnown RBP18.4■□□□□ 0.54
CCS-208ENST00000533244 SNRPB2P08579 225 aaKnown RBP18.4■□□□□ 0.54
CCS-208ENST00000533244 NID1P14543 1247 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 IGFBP2P18065 325 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 GPX2P18283 190 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 IL11P20809 199 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 PRAMEF8Q5VWM4 474 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 PRAMEF7Q5VXH5 474 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 GRAMD2AQ8IUY3 354 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 WDR60Q8WVS4 1066 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 C10orf82Q8WW14 230 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 ST8SIA1Q92185 356 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 SMPDL3BQ92485 455 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 CPPED1Q9BRF8 314 aaPredicted RBP18.4■□□□□ 0.54
CCS-208ENST00000533244 ENKD1Q9H0I2 346 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 ZNF175Q9Y473 711 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 DVL2O14641 736 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 ADAM11O75078 769 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 PGCP20142 388 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 CTSSP25774 331 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 CCR4P51679 360 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 RPS3AP61247 264 aaKnown RBP18.39■□□□□ 0.53
CCS-208ENST00000533244 SF3A3Q12874 501 aaKnown RBP eCLIP18.39■□□□□ 0.53
CCS-208ENST00000533244 GNA13Q14344 377 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 RUNDC3AQ59EK9 446 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 ESPNLQ6ZVH7 1005 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 CHMP1BQ7LBR1 199 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 DHDDSQ86SQ9 333 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 CNOT9Q92600 299 aaKnown RBP18.39■□□□□ 0.53
CCS-208ENST00000533244 PINK1Q9BXM7 581 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 BCL2L10Q9HD36 194 aa18.39■□□□□ 0.53
CCS-208ENST00000533244 DNAJB12Q9NXW2 375 aaKnown RBP18.39■□□□□ 0.53
CCS-208ENST00000533244 PKDREJQ9NTG1 2253 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 A0A0G2JPF8 293 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 SLC22A20A6NK97 555 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 HNRNPCL2B2RXH8 293 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 HNRNPCL3B7ZW38 293 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 EIF1AYO14602 144 aaKnown RBP18.38■□□□□ 0.53
CCS-208ENST00000533244 ANGPT2O15123 496 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 HNRNPRO43390 633 aaKnown RBP18.38■□□□□ 0.53
CCS-208ENST00000533244 HNRNPCL1O60812 293 aaKnown RBP18.38■□□□□ 0.53
CCS-208ENST00000533244 CYP7B1O75881 506 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 HNRNPCL4P0DMR1 293 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 TMIGD3P0DMS9 266 aaPredicted RBP18.38■□□□□ 0.53
CCS-208ENST00000533244 ARAFP10398 606 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 ME2P23368 584 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 FOXF2Q12947 444 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 KLF10Q13118 480 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 PEX5LQ8IYB4 626 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 LILRA2Q8N149 483 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 FIG4Q92562 907 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 MAL2Q969L2 176 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 ZNF845Q96IR2 970 aaPredicted RBP18.38■□□□□ 0.53
CCS-208ENST00000533244 SPOCK3Q9BQ16 436 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 ACER3Q9NUN7 267 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 PAQR5Q9NXK6 330 aaPredicted RBP18.38■□□□□ 0.53
CCS-208ENST00000533244 CORO2BQ9UQ03 480 aa18.38■□□□□ 0.53
CCS-208ENST00000533244 A0A0J9YW62 118 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 TMEM247A6NEH6 219 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 FBP2O00757 339 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 THBS1P07996 1170 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 IL7RP16871 459 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 BMP5P22003 454 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 SHC1P29353 583 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 ADSLP30566 484 aaPredicted RBP18.37■□□□□ 0.53
CCS-208ENST00000533244 SESN3P58005 492 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 SELENBP1Q13228 472 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 FBXL19-AS1Q494R0 122 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 RPS26P11Q5JNZ5 115 aaPredicted RBP18.37■□□□□ 0.53
CCS-208ENST00000533244 GCNT6Q5T4J0 391 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 MRPL2Q5T653 305 aaKnown RBP18.37■□□□□ 0.53
CCS-208ENST00000533244 OR52P1PQ8NH57 321 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 OR10D3Q8NH80 312 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 OR2V1Q8NHB1 315 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 TMEM234Q8WY98 164 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 KLHL15Q96M94 604 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 ANKRD27Q96NW4 1050 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 CGREF1Q99674 301 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 SFXN3Q9BWM7 321 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 TMEM38AQ9H6F2 299 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 TMEM185BQ9H7F4 350 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 RNF122Q9H9V4 155 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 JKAMPQ9P055 326 aa18.37■□□□□ 0.53
CCS-208ENST00000533244 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.37■□□□□ 0.53
CCS-208ENST00000533244 CDHR4A6H8M9 788 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms