RNA–Protein interactions for RNA: ENST00000533188.1

CSRP1-217, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-217ENST00000533188 ZNF708P17019 499 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 PRKCAP17252 672 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 PSMA4P25789 261 aaKnown RBP13.11□□□□□ -0.31
CSRP1-217ENST00000533188 AQP1P29972 269 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 ADH7P40394 386 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 NUP107P57740 925 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 KCNJ10P78508 379 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 CDK6Q00534 326 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 SCARB2Q14108 478 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 GNA13Q14344 377 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 QPRTQ15274 297 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 LIN52Q52LA3 116 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 NET1Q7Z628 596 aaPredicted RBP13.11□□□□□ -0.31
CSRP1-217ENST00000533188 PEX5LQ8IYB4 626 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 ZZZ3Q8IYH5 903 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 PM20D2Q8IYS1 436 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 GTPBP8Q8N3Z3 284 aaPredicted RBP13.11□□□□□ -0.31
CSRP1-217ENST00000533188 TOR1AIP2Q8NFQ8 470 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 OR52P1PQ8NH57 321 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 RP9Q8TA86 221 aaKnown RBP13.11□□□□□ -0.31
CSRP1-217ENST00000533188 BBS10Q8TAM1 723 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 ZBTB8AQ96BR9 441 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 CCT8L2Q96SF2 557 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 TUBA1CQ9BQE3 449 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
CSRP1-217ENST00000533188 LAT2Q9GZY6 243 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 PIF1Q9H611 641 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 TMEM38AQ9H6F2 299 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 TMEM185BQ9H7F4 350 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 MTHFD2LQ9H903 347 aaPredicted RBP13.11□□□□□ -0.31
CSRP1-217ENST00000533188 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.11□□□□□ -0.31
CSRP1-217ENST00000533188 RLIMQ9NVW2 624 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 USP22Q9UPT9 525 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 A0A0G2JPF8 293 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 HNRNPCL2B2RXH8 293 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 HNRNPCL3B7ZW38 293 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 AIM2O14862 343 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 HNRNPCL1O60812 293 aaKnown RBP13.1□□□□□ -0.31
CSRP1-217ENST00000533188 FAM107AO95990 144 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 HNRNPCL4P0DMR1 293 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 PEPDP12955 493 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 CPN1P15169 458 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 CLDN15P56746 228 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 CLDN20P56880 219 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 EEF1A1P68104 462 aaKnown RBP13.1□□□□□ -0.31
CSRP1-217ENST00000533188 CBFBQ13951 182 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 CDSNQ15517 529 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 GLYR1Q49A26 553 aaPredicted RBP13.1□□□□□ -0.31
CSRP1-217ENST00000533188 PRAMEF8Q5VWM4 474 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 PRAMEF7Q5VXH5 474 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 REEP3Q6NUK4 255 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 ENPP6Q6UWR7 440 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 B3GNT6Q6ZMB0 384 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 SEM1Q6ZVN7 128 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 GGNQ86UU5 652 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 COMTD1Q86VU5 262 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 PCYOX1LQ8NBM8 494 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 OR8J3Q8NGG0 315 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 OR10A6Q8NH74 314 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 PHF10Q8WUB8 498 aaKnown RBP13.1□□□□□ -0.31
CSRP1-217ENST00000533188 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 TTYH2Q9BSA4 534 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 BCL2L10Q9HD36 194 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 ADAM21Q9UKJ8 722 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 CHST2Q9Y4C5 530 aa13.1□□□□□ -0.31
CSRP1-217ENST00000533188 MED12LQ86YW9 2145 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 CDHR4A6H8M9 788 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 PRSS44E7EML9 344 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 HNRNPRO43390 633 aaKnown RBP13.09□□□□□ -0.31
CSRP1-217ENST00000533188 DNAJA2O60884 412 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 NTN1O95631 604 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 OPN1LWP04000 364 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 THBS1P07996 1170 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 PABPC4LP0CB38 370 aaKnown RBP13.09□□□□□ -0.31
CSRP1-217ENST00000533188 GLI4P10075 376 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 GABRA1P14867 456 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 SLC6A2P23975 617 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 SHC1P29353 583 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 RYKP34925 604 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 CPA2P48052 419 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 NUDT2P50583 147 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 GZMMP51124 257 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 SUCLG1P53597 346 aaKnown RBP13.09□□□□□ -0.31
CSRP1-217ENST00000533188 PMPCAQ10713 525 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 ART3Q13508 389 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 RNF220Q5VTB9 566 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 MTFR2Q6P444 385 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 CMIPQ8IY22 773 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 EID3Q8N140 333 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 CLIP4Q8N3C7 705 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 C11orf65Q8NCR3 313 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 HIPK4Q8NE63 616 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 FBXO27Q8NI29 283 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 PMM1Q92871 262 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 TRIB1Q96RU8 372 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 EXOSC3Q9NQT5 275 aaKnown RBP13.09□□□□□ -0.31
CSRP1-217ENST00000533188 GID8Q9NWU2 228 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 GMPR2Q9P2T1 348 aaKnown RBP13.09□□□□□ -0.31
CSRP1-217ENST00000533188 ANGPT4Q9Y264 503 aa13.09□□□□□ -0.31
CSRP1-217ENST00000533188 CLCA1A8K7I4 914 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms