RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MAGEA8P43361 318 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 DSTNP60981 165 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 CRYZQ08257 329 aaKnown RBP10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 RBBP4Q09028 425 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 DUSP8Q13202 625 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 LASP1Q14847 261 aaKnown RBP10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 VMACQ2NL98 169 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 KRTAP24-1Q3LI83 254 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 WIPI1Q5MNZ9 446 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 SLC22A10Q63ZE4 541 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 TNFAIP8L2Q6P589 184 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 PLEKHM3Q6ZWE6 761 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 SPATA24Q86W54 205 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 GALNT12Q8IXK2 581 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR5L2Q8NGL0 311 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR8K3Q8NH51 312 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 XAGE5Q8WWM1 108 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 FIG4Q92562 907 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 RAB8BQ92930 207 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 MAL2Q969L2 176 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 GIMAP5Q96F15 307 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 LRGUKQ96M69 825 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 TRIB1Q96RU8 372 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 SFXN3Q9BWM7 321 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 PRDM14Q9GZV8 571 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR51I1Q9H343 314 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 SERHL2Q9H4I8 314 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 CXorf56Q9H5V9 222 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 ADAP2Q9NPF8 381 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZNF639Q9UID6 485 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 FAF1Q9UNN5 650 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 CLCA3PQ9Y6N3 262 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZANQ9Y493 2812 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 AQP12BA6NM10 295 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 DEFB108AA8MXU0 73 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 C17orf105B2RV13 164 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 HRKO00198 91 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 HMGN4O00479 90 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 SOX30O94993 753 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 CBX7O95931 251 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 TMIGD3P0DMS9 266 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR12D1P0DN82 309 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 ARAFP10398 606 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 PCGF2P35227 344 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 KHKP50053 298 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 ANXA11P50995 505 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 EXOSC7Q15024 291 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 ELAVL1Q15717 326 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 LCN8Q6JVE9 175 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 LUZP2Q86TE4 346 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 AQP12AQ8IXF9 295 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 C10orf67Q8IYJ2 551 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZNF441Q8N8Z8 693 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 C11orf65Q8NCR3 313 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 MORN4Q8NDC4 146 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR52R1Q8NGF1 315 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 MIPOL1Q8TD10 442 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 SLC26A7Q8TE54 656 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 PTPMT1Q8WUK0 201 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 TMEM171Q8WVE6 324 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 DAZLQ92904 295 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 PIK3IP1Q96FE7 263 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 SLC35A4Q96G79 324 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 SENP5Q96HI0 755 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 NSMCE2Q96MF7 247 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZFP3Q96NJ6 502 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR7D2Q96RA2 312 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 C19orf24Q9BVV8 132 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 ACTRT3Q9BYD9 372 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 TRIM15Q9C019 465 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 PIGMQ9H3S5 423 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 TMEM38AQ9H6F2 299 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 GORASP2Q9H8Y8 452 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 A4GALTQ9NPC4 353 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 EQTNQ9NQ60 294 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZNF701Q9NV72 531 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 MAGEL2Q9UJ55 1249 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 KCNE3Q9Y6H6 103 aa10.23□□□□□ -0.77
TRAPPC4-213ENST00000533149 A8MV72 311 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 RNF223E7ERA6 249 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 KRT36O76013 467 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 TFPTP0C1Z6 253 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 KDELR2P33947 212 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 ATP5J2P56134 94 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 EEF1A1P68104 462 aaKnown RBP10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 RNF4P78317 190 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 TXNL4AP83876 142 aaKnown RBP10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 CDK6Q00534 326 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 FUT7Q11130 342 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 RIPK1Q13546 671 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 SCARB2Q14108 478 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 VEZF1Q14119 521 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 EEF1A1P5Q5VTE0 462 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 MFSD12Q6NUT3 480 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 CDC73Q6P1J9 531 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZCCHC12Q6PEW1 402 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR5D16Q8NGK9 328 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 NFKBIDQ8NI38 313 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 FBXO30Q8TB52 745 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 ADAMTS15Q8TE58 950 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms