RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PGM1P36871 562 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 EIF1AXP47813 144 aaKnown RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 EEF1A1P68104 462 aaKnown RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 IRX1P78414 480 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 GUCY1A3Q02108 690 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 SQLEQ14534 574 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 QPRTQ15274 297 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 SGCBQ16585 318 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 CTU2Q2VPK5 515 aaKnown RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 EEF1A1P5Q5VTE0 462 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 SLC2A7Q6PXP3 512 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 BLOC1S3Q6QNY0 202 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 LRRC74BQ6ZQY2 392 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 ESPNLQ6ZVH7 1005 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 HMGN2P46Q86SG4 172 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 LILRA2Q8N149 483 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 OR10D3Q8NH80 312 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 ZNF524Q96C55 264 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 AURKBQ96GD4 344 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 MRGPRX4Q96LA9 322 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 THUMPD3Q9BV44 507 aaKnown RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 PAIP1Q9H074 479 aaKnown RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 QRSL1Q9H0R6 528 aaKnown RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 SLC24A3Q9HC58 644 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 NPHS2Q9NP85 383 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 FOXD3Q9UJU5 478 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 DCTN4Q9UJW0 460 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 SLC35A3Q9Y2D2 325 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 PCDHB14Q9Y5E9 798 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 A0A096LPI6 279 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 A0A0J9YW62 118 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 ETV2O00321 342 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-210ENST00000532935 NR5A2O00482 541 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 TNFSF11O14788 317 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 ADAMDEC1O15204 470 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 EFNA2O43921 213 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 DNAJA2O60884 412 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 BCAS1O75363 584 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-210ENST00000532935 TNFSF13O75888 250 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 NTN1O95631 604 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 SFTPDP35247 375 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 CRATP43155 626 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 TLE4Q04727 773 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 AGKQ53H12 422 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 SLC25A53Q5H9E4 307 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 FAM71CQ8NEG0 241 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 OR2V1Q8NHB1 315 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 SPDL1Q96EA4 605 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 KLHL15Q96M94 604 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 SIKE1Q9BRV8 207 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 PIGMQ9H3S5 423 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 RNF122Q9H9V4 155 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 TMEM45AQ9NWC5 275 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 PAQR5Q9NXK6 330 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-210ENST00000532935 P2RX2Q9UBL9 471 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 KCNN3Q9UGI6 736 aa13.8□□□□□ -0.2
CPSF1-210ENST00000532935 ANKRD17O75179 2603 aaKnown RBP13.79□□□□□ -0.2
CPSF1-210ENST00000532935 GMNCA6NCL1 334 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 AGAP5A6NIR3 686 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 CLDN24A6NM45 220 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 CXCL13O43927 109 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 AQP8O94778 261 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 FCGR2AP12318 317 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 HOXB9P17482 250 aaPredicted RBP13.79□□□□□ -0.2
CPSF1-210ENST00000532935 NCF2P19878 526 aaPredicted RBP13.79□□□□□ -0.2
CPSF1-210ENST00000532935 PGCP20142 388 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 CAPN3P20807 821 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 SHC1P29353 583 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 PEX19P40855 299 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 SLC6A8P48029 635 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 DSTNP60981 165 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 KCNJ10P78508 379 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 SNTB1Q13884 538 aaKnown RBP13.79□□□□□ -0.2
CPSF1-210ENST00000532935 MAPK11Q15759 364 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 PDSS1Q5T2R2 415 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 HBMQ6B0K9 141 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 PPP4R4Q6NUP7 873 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 LUZP2Q86TE4 346 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 CNEP1R1Q8N9A8 125 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 ST8SIA1Q92185 356 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 PMM1Q92871 262 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 ZNF559Q9BR84 538 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 PRRG4Q9BZD6 226 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 RABEP2Q9H5N1 569 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 MTHFD2LQ9H903 347 aaPredicted RBP13.79□□□□□ -0.2
CPSF1-210ENST00000532935 SLC52A3Q9NQ40 469 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 PACSIN3Q9UKS6 424 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 MCTS1Q9ULC4 181 aaKnown RBP13.79□□□□□ -0.2
CPSF1-210ENST00000532935 POLQO75417 2590 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 HRNRQ86YZ3 2850 aaPredicted RBP13.79□□□□□ -0.2
CPSF1-210ENST00000532935 CREBBPQ92793 2442 aa13.79□□□□□ -0.2
CPSF1-210ENST00000532935 A0A0G2JND7 137 aa13.78□□□□□ -0.2
CPSF1-210ENST00000532935 GJE1A6NN92 205 aa13.78□□□□□ -0.2
CPSF1-210ENST00000532935 CLIC1O00299 241 aa13.78□□□□□ -0.2
CPSF1-210ENST00000532935 BCHEP06276 602 aa13.78□□□□□ -0.2
CPSF1-210ENST00000532935 TFPTP0C1Z6 253 aa13.78□□□□□ -0.2
CPSF1-210ENST00000532935 RPS4Y1P22090 263 aaKnown RBP13.78□□□□□ -0.2
CPSF1-210ENST00000532935 KIR2DL2P43627 348 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms