RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 FTSJ1Q9UET6 329 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 IGLV3-16A0A075B6K0 115 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 UGT2B10P36537 528 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 TLE3Q04726 772 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 RAB11BQ15907 218 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 PRAMEF8Q5VWM4 474 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 PRAMEF7Q5VXH5 474 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 RAET1LQ5VY80 246 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 PTOV1Q86YD1 416 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 FAM174AQ8TBP5 190 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 CASTOR1Q8WTX7 329 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 ELSPBP1Q96BH3 223 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 WDR77Q9BQA1 342 aaPredicted RBP14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 CRB3Q9BUF7 120 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 DUSP21Q9H596 190 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 SACM1LQ9NTJ5 587 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 C2orf42Q9NWW7 574 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 TAS2R8Q9NYW2 309 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 LRIT1Q9P2V4 623 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 PPIL1Q9Y3C6 166 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 CENPBD1B2RD01 187 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 I3L521 148 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 CREBL2O60519 120 aaPredicted RBP14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 SNAPC5O75971 98 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 MMP11P24347 488 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 CRABP1P29762 137 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 GABRA5P31644 462 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 PDX1P52945 283 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 ARPC4P59998 168 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 SFRP4Q6FHJ7 346 aaPredicted RBP14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 LINC00615Q96LM1 132 aaPredicted RBP14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 ZNF304Q9HCX3 659 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 ATXN7L1Q9ULK2 861 aaPredicted RBP14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 MICAL3Q7RTP6 2002 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 COL11A1P12107 1806 aaPredicted RBP14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 MEGF11A6BM72 1044 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 SMAD9O15198 467 aaKnown RBP14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 CD1EP15812 388 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 EMP2P54851 167 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 RAB2AP61019 212 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 SF3A2Q15428 464 aaKnown RBP14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 PLK5Q496M5 336 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 RBM45Q8IUH3 476 aaKnown RBP14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 OR13C3Q8NGS6 347 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 MMP28Q9H239 520 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 C1GALT1Q9NS00 363 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 TBC1D29Q9UFV1 150 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 SLC23A2Q9UGH3 650 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 RASD1Q9Y272 281 aa14.28□□□□□ -0.12
PCDHA3-202ENST00000532566 ASPDHA6ND91 283 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 FPR3P25089 353 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 PSMB10P40306 273 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 OPRD1P41143 372 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 MAGEA2P43356 314 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 CAPZA1P52907 286 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 NKX3-2P78367 333 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 TDGQ13569 410 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 DDIT4LQ96D03 193 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 URM1Q9BTM9 101 aaKnown RBP14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 STRADBQ9C0K7 418 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 TEX13CA0A0J9YWL9 993 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 GABRPO00591 440 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 HPGDSO60760 199 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 TOXO94900 526 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 EID2BQ96D98 161 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 PITX2Q99697 317 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 MRI1Q9BV20 369 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 PCDHB16Q9NRJ7 776 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 NEU3Q9UQ49 428 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 MAB21L2Q9Y586 359 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 SNX11Q9Y5W9 270 aa14.27□□□□□ -0.12
PCDHA3-202ENST00000532566 C13orf42A0A1B0GVH6 325 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 A0A1W2PR48 441 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 WASHC1A8K0Z3 465 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 EPHA5P54756 1037 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 SNRPGP62308 76 aaKnown RBP14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 BCL2L15Q5TBC7 163 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 NXNL2Q5VZ03 156 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 WASH2PQ6VEQ5 465 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF417Q8TAU3 575 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 SGCDQ92629 289 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 PGAM5Q96HS1 289 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 INTS14Q96SY0 518 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 MCCC2Q9HCC0 563 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 LTB4R2Q9NPC1 389 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 VNN3Q9NY84 501 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 MGAT4CQ9UBM8 478 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 NUFIP1Q9UHK0 495 aaKnown RBP14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 POM121BA6NF01 834 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 HMGN4O00479 90 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 EGFP01133 1207 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 DRD5P21918 477 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 MRPL19P49406 292 aaKnown RBP14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 MAT1AQ00266 395 aaKnown RBP14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 GALK2Q01415 458 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC6A19Q695T7 634 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 EIF5AL1Q6IS14 154 aaKnown RBP14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF322Q6U7Q0 402 aaPredicted RBP14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 LINC00299Q6ZSB3 139 aa14.27□□□□□ -0.13
PCDHA3-202ENST00000532566 OR13H1Q8NG92 308 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms